Job Description P30844 Confidence 99.97% Date Thu Jan 5 11:46:28 GMT 2012 Rank 4 Aligned Residues 273 % Identity 13% Template c1y8oA_ PDB info PDB header:transferase Chain: A: PDB Molecule:[pyruvate dehydrogenase [lipoamide]] kinase isozyme 3; PDBTitle: crystal structure of the pdk3-l2 complex Resolution 2.48 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	Y	Q	A	V	R	R	I	T	R	P	L	A	E	L	Q	K	E	L	E	A	R	T	A	D	N	L	T	P	I	A	I	H	S	A	T	L	E	I	E	A	V	V	S	A	L	N	D	L	V	S	R	L	T	S	T	L	D	N	E	R	L	F	T	A	D	V	A	H	E	L	R	T	P	L	A	G	V	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	M	F	L	R	K	E	L	P	V	R	L	A	N	T	M	R	E	V	N	L	L	P	D	N	L	L	N	R	P	S	V	G	L	V	Q	S	W	Y	M	Q	S	F	L	E	L	L	E	Y	E	N	K	S	P	E	D	P	Q	V	L	D	N	F	L	Q	V	L	I	K	V	R	N	R	H	N	D	V	V	P	T
Template Known Secondary structure																					T	T	S						T	S																			G	G	G	G			T	T																			G	G	G
Template Predicted Secondary structure
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		164	.	.	.	.														.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.													.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	L	E	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	T	H	H	I	D	V	A	P	L	V	A	R	L	D	Q	M	M	E	S	V	S	Q	L	L	Q	L	A	R	A	G	Q	S	F	.	.	.	.	.	.	.	.	.	.	.	.	S	S	G	N	Y	Q	H	V	K	L	L	E	D	V	I
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	A	Q	G	V	I	E	Y	K	E	K	F	G	F	D	P	F	I	S	T	N	I	Q	Y	F	L	D	R	F	Y	T	N	R	I	S	F	R	M	L	I	N	Q	H	T	L	L	F	G	G	D	T	N	P	V	H	P	K	H	I	G	S	I	D	P	T	C	N	V	A	D	V	V	K	D	A	Y	E	T	A	K
Template Known Secondary structure																																																	S			S	S		S	S	T	T	S	B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.										.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.
Query Sequence		L	P	S	Y	D	E	L	S	T	M	L	D	Q	R	Q	Q	T	L	L	L	P	E	S	A	A	D	I	T	V	Q	G	D	A	T	L	L	R	M	L	L	R	N	L	V	E	N	A	H	R	Y	.	.	.	.	.	.	.	.	.	S	P	Q	G	S	N	I	M	I	K	L	Q	E	D	D	G	A	V	M	A	V
Query Conservation																																																				.	.	.	.	.	.	.	.	.
Alig confidence																																																				.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	L	C	E	Q	Y	Y	L	V	A	P	E	L	E	V	E	E	F	N	A	K	A	P	D	K	P	I	Q	V	V	Y	V	P	S	H	L	F	H	M	L	F	E	L	F	K	N	S	M	R	A	T	V	E	L	Y	E	D	R	K	E	G	Y	P	A	V	K	T	L	V	T	L	G	K	E	D	L	S	I	K	I
Template Known Secondary structure									S												T	T	S	T	T	S																															T	T		S	S													S	S
Template Predicted Secondary structure
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	E	G	P	G	I	D	E	S	K	C	G	E	L	S	K	A	F	V	R	M	D	S	R	Y	G	G	I	G	L	G	L	S	I	V	S	R	I	T	Q	L	H	H	G	Q	F	F	L	Q	N	R	Q	E	T	S	G	T	R	A	W	V	R	L	K	K	D	Q	Y	V	A	N	Q
Query Conservation
Alig confidence																								.	.	.	.	.																									.
Template Conservation																								.	.	.	.	.																									.
Template Sequence		S	D	L	G	G	G	V	P	L	R	K	I	D	R	L	F	N	Y	M	Y	S	P	.	.	.	.	.	L	F	G	Y	G	L	P	I	S	R	L	Y	A	R	Y	F	Q	G	D	L	K	L	Y	S	.	M	E	G	V	G	T	D	A	V	I	Y	L	K	A	L	S	S	E	S	F	E
Template Known Secondary structure					S									G	G	G	G		T	T	T			.	.	.	.	.			T	T												T	T								.		T	T	T										S		G	G	G		B
Template Predicted Secondary structure																								.	.	.	.	.																									.
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.						.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.		.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions