Job Description P30844 Confidence 96.95% Date Thu Jan 5 11:46:28 GMT 2012 Rank 53 Aligned Residues 111 % Identity 14% Template c1qzrA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:dna topoisomerase ii; PDBTitle: crystal structure of the atpase region of saccharomyces cerevisiae2 topoisomerase ii bound to icrf-187 (dexrazoxane) Resolution 1.90 Å

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		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.									300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.															.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.															.	.	.
Query Sequence		I	T	V	Q	G	D	A	T	L	L	R	M	L	L	R	N	L	V	E	N	A	H	R	Y	S	P	Q	G	S	N	I	M	I	K	L	Q	E	D	D	G	A	V	M	A	V	E	D	E	G	P	G	I	D	E	S	.	.	.	.	.	.	.	.	K	C	G	E	L	S	K	A	F	V	R	M	D	S	.	.	.
Query Conservation																																																									.	.	.	.	.	.	.	.															.	.	.
Alig confidence																																										.	.														.	.	.	.	.	.	.	.															.	.	.
Template Conservation																																										.	.
Template Sequence		T	I	V	P	G	L	F	K	I	F	D	E	I	L	V	N	A	A	D	N	K	V	R	D	P	S	M	K	R	I	D	V	N	I	H	A	E	E	H	T	.	.	I	E	V	K	N	D	G	K	G	I	P	I	E	I	H	N	K	E	N	I	Y	I	P	E	M	I	F	G	H	L	L	T	S	S	N	Y	D	D
Template Known Secondary structure																										T	T										T	T	T	T		.	.							S	S					S	B		T	T	T		S	B								S	S	S			S				T
Template Predicted Secondary structure																																										.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
							314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	R	Y	G	G	I	G	L	G	L	S	I	V	S	R	I	T	Q	L	H	H	G	Q	F	F	L	Q	N	R	Q	E	T	S	G	T	R	A	W	V	R	L	K	K	D	Q	Y	V	A	N
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.																				.	.									.	.
Template Conservation																										.	.									.	.
Template Sequence		D	E	K	K	V	T	G	G	R	N	G	Y	G	A	K	L	C	N	I	F	S	T	E	F	.	.	I	L	E	T	A	D	L	N	.	.	V	G	Q	K	Y	V	Q	K	W	E	N	N	M	S	I	C	H
Template Known Secondary structure		T	S					S			S	S									T					.	.							T	T	.	.	T	T									T	T	T	T
Template Predicted Secondary structure																										.	.									.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.			.	.	.	160	.	.	.	.			.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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