Return to main results Retrieve Phyre Job Id

Job DescriptionP30844
Confidence97.73%DateThu Jan 5 11:46:28 GMT 2012
Rank38Aligned Residues89
% Identity18%Templatec1bknA_
PDB info PDB header:dna repairChain: A: PDB Molecule:mutl; PDBTitle: crystal structure of an n-terminal 40kd fragment of e. coli2 dna mismatch repair protein mutl
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   255....260.........270.........280.........290.........300.........310........ .320.........330
Predicted Secondary structure 
































....
Query SS confidence 































































. . . .











Query Sequence  RMLLRNLVENAHRYSPQGSNIMIKLQEDDGAVMAVEDEGPGIDESKCGELSKAFVRMDSRYGGI. . . . GLGLSIVSRITQ
Query Conservation    
  

  
                      
 
 
 
 

       

  
        
 ....



 

  
  
Alig confidence 





























..































....






.....
Template Conservation   












 

 
 
 
   
   ..
 
 


 

   

    
     

    
 






 

.....
Template Sequence  ASVVKELVENSLDAGATRIDIDIERGGAKL. . IRIRDNGCGIKKDELALALAIASLDDLEAIISLGFRGEALASI. . . . .
Template Known Secondary structure  TT
STTTTS..SS





TTTS
GGG
.....
Template Predicted Secondary structure 






..


















.....
Template SS confidence 















































































   24.....30.........40.........50... ......60.........70.........80.........90......
 
   331........340.........350
Predicted Secondary structure 








Query SS confidence 



















Query Sequence  LHHGQFFLQNRQETSGTRAW
Query Conservation    

 
 
 
   
 

 
 
Alig confidence 



















Template Conservation     
 
 
 

         
Template Sequence  SSVSRLTLTSRTAEQQEAWQ
Template Known Secondary structure  TTS



SSS

Template Predicted Secondary structure 








Template SS confidence 



















   103......110.........120..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions