Return to main results Retrieve Phyre Job Id

Job DescriptionP27254
Confidence99.02%DateThu Jan 5 11:43:35 GMT 2012
Rank237Aligned Residues172
% Identity17%Templated2fn4a1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins
Resolution1.65

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4950.........60.........70.........80.........90.........100.........110.........120........
Predicted Secondary structure 








































Query SS confidence 















































































Query Sequence  PYCGNTLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSILGDKTRMNDLARAEAAFIRPVPSSGHL
Query Conservation          


 
 









 
       
  



  

 

         
             
    
 
  
Alig confidence 



























.........









.........























Template Conservation 


    





   






 
   .........  
       .........                        
Template Sequence  PPPSETHKLVVVGGGGVGKSALTIQFIQ. . . . . . . . . SYFVSDYDPT. . . . . . . . . IEDSYTKICSVDGIPARLDILDTA
Template Known Secondary structure 

SS

TTSS.........SS

SS

TT.........

TT

Template Predicted Secondary structure 










.........









.........










Template SS confidence 















































































   24.....30.........40.........50. ........60. ........70.........80.....
 
   129130.........140.........150.........160.........170.........180.........190.........200........
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  GGASQRARELMLLCEAAGYDVVIVETVGVGQSETEVARMVDCFISLQIAGGGDDLQGIKKGLMEVADLIVINKDDGDNHT
Query Conservation                     
  


  
            
    
                     


 

 
     
Alig confidence 





































...............


























Template Conservation                                        ...............                           
Template Sequence  GQEEFGAMREQYMRAGHGFLLVFAINDRQSFNEVGKLF. . . . . . . . . . . . . . . TQILRVKDRDDFPVVLVGNKADLESQR
Template Known Secondary structure 
TTTTS


STT
...............TSS



GGGGGG
Template Predicted Secondary structure 

















...............
















Template SS confidence 















































































   86...90.........100.........110.........120... ......130.........140.........150
 
   209210.........220.........230.........240.........250.........260..
Predicted Secondary structure 













Query SS confidence 





















































Query Sequence  NVAIARHMYESALHILRRKYDEWQPRVLTCSALEKRGIDEIWHAIIDFKTALTA
Query Conservation              
             

 


  
 

 

   
         
Alig confidence 











.........
































Template Conservation              .........       
 




 

 
 
  
   
     
Template Sequence  QVPRSEASAFGA. . . . . . . . . SHHVAYFEASAKLRLNVDEAFEQLVRAVRKYQE
Template Known Secondary structure 
S
.........TT

BTTTTBSTT
Template Predicted Secondary structure 


.........








Template SS confidence 





















































   151........160.. .......170.........180.........190.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions