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Job DescriptionP27254
Confidence99.76%DateThu Jan 5 11:43:35 GMT 2012
Rank34Aligned Residues163
% Identity29%Templated2dy1a2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   56...60.........70.........80....... ..90.........100.........110.........120....
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Query Sequence  RLGVTGTPGAGKSTFLEAFGMLLIREGLKVAV. . . . . . . . . . . IAVDPSSPVTGGSILGDKTRMNDLARAEAAFIRPVPS
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Template Sequence  TVALVGHAGSGKTTLTEALLYKTGAKERRGRVEEGTTTTDYTPEAKLHRTTVRT. . . . . . . . . GVAPLLFRGHRVFLLDA
Template Known Secondary structure  STTSSTTSSSS


GGGT

SS

STTS

S
.........TT
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   11........20.........30.........40.........50.........60.... .....70.........80.
 
   125....130.........140.........150.........160.........170.........180 .........190.........200
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Query Sequence  SGHLGGASQRARELMLLCEAAGYDVVIVETVGVGQSETEVARMVDCFISLQIAGGG. . . . DDLQGIKKGLMEVADLIVIN
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Template Sequence  PGYGDFVGE. . . . . . . . . . . . . . . . . . . . . . . . . . . IRGALEAADAALVAVSAEAGVQVGTERAWTVAERLGLPRMVVVT
Template Known Secondary structure 

SGGG...........................
STTT
S
TT

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   82.......90 .........100.........110.........120.........130....
 
   201........210.........220.........230
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Query Sequence  KDDGDNHTNVAIARHMYESALHILRRKYDE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  KLDKGGDY. . YALLEDLRSTLGPILPIDLPLYEGGKWVGLIDVFHGKAYRYENGEEREAEVPPEERERVQRFRQEVLEAI
Template Known Secondary structure 
GGG


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S
TTTTTTTT


GGG
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   135....140.. .......150.........160.........170.........180.........190.........200.........210..
 
   231........240.........250......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . WQPRVLTCSALEKRGIDEIWHAIIDF
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Template Sequence  VETDEGLLEKYLEGEEVTGEALEKAFHEAVRRGLLYPVALASGEREIGVLPLLELILEA
Template Known Secondary structure  TT
T



TTS

BTTTTBS
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   213......220.........230.........240.........250.........260.........270.
 
Download:Text version

No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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