Return to main results Retrieve Phyre Job Id

Job DescriptionP27254
Confidence98.90%DateThu Jan 5 11:43:35 GMT 2012
Rank262Aligned Residues163
% Identity18%Templated2c2ha1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins
Resolution1.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   54.....60.........70.........80.........90.........100.........110.........120.........130...
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  TLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSILGDKTRMNDLARAEAAFIRPVPSSGHLGGASQ
Query Conservation     


 
 









 
       
  



  

 

         
             
    
 
       
Alig confidence 






















......................


































Template Conservation 



 


   






 
   ......................  
                                
Template Sequence  AIKCVVVGDGAVGKTCLLISYTT. . . . . . . . . . . . . . . . . . . . . . NAFPGDNYSANVMVDGKPVNLGLWDTAGQEDYDRL
Template Known Secondary structure 

STTSS......................S




TT



SGGGTTT
Template Predicted Secondary structure 







......................



















Template SS confidence 















































































   3......10.........20..... ....30.........40.........50.........60
 
   134.....140.........150.........160.........170.........180.........190.........200.........210...
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  RARELMLLCEAAGYDVVIVETVGVGQSETEVARMVDCFISLQIAGGGDDLQGIKKGLMEVADLIVINKDDGDNHTNVAIA
Query Conservation                
  


  
            
    
                     


 

 
          
Alig confidence 
......



























.............































Template Conservation   ......                            .............                                
Template Sequence  R. . . . . . PLSYPQTDVFLICFSLVSPASFENVRAK. . . . . . . . . . . . . WYPEVRHHCPHTPILLVGTKLDLRDDKDTIER
Template Known Secondary structure  G......GGG
TT
STT
T.............SSSS

GGGTT
Template Predicted Secondary structure 
......











.............















Template SS confidence 















































































   68 .70.........80.........90...... ...100.........110.........120........
 
   214.....220...... ...230.........240.........250.......
Predicted Secondary structure  ....











Query SS confidence 












. . . .






























Query Sequence  RHMYESALHILRR. . . . KYDEWQPRVLTCSALEKRGIDEIWHAIIDFK
Query Conservation         
     ....        

 


  
 

 

   
    
Alig confidence 












....






























Template Conservation                             
 




  
 
 
  
   
Template Sequence  LRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAV
Template Known Secondary structure  TT




TT
S

TTT
TT
Template Predicted Secondary structure 













Template SS confidence 















































   129130.........140.........150.........160.........170......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions