Return to main results Retrieve Phyre Job Id

Job DescriptionP27254
Confidence99.08%DateThu Jan 5 11:43:35 GMT 2012
Rank218Aligned Residues161
% Identity16%Templated1z2ca1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   55....60.........70.........80.........90.........100.........110.........120.........130....
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  LRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSILGDKTRMNDLARAEAAFIRPVPSSGHLGGASQR
Query Conservation    


 
 









 
       
  



  

 

         
             
    
 
        
Alig confidence 




















......













.........
























.....
Template Conservation   





   






    ......   
          .........                         .....
Template Sequence  KKLVIVGDGACGKTCLLIVNS. . . . . . KDQFPEVYVPTVFE. . . . . . . . . NYIADIEVDGKQVELALWDTAGQED. . . . .
Template Known Secondary structure  STTSS......T



SS



S.........TT

SGG.....
Template Predicted Secondary structure 





......








.........













.....
Template SS confidence 















































































   6...10.........20...... ...30.........40 .........50.........60.....
 
   135....140.........150.........160.........170.........180.... .....190.........200......
Predicted Secondary structure 















........









Query SS confidence 

















































. . . . . . . .





















Query Sequence  ARELMLLCEAAGYDVVIVETVGVGQSETEVARMVDCFISLQIAGGGDDLQ. . . . . . . . GIKKGLMEVADLIVINKDDGDN
Query Conservation               
  


  
            
    
          ........           


 

 
   
Alig confidence  ......................



























........





















Template Conservation  ......................               
                                    
 
   
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRQ
Template Known Secondary structure  ......................GTTTGGGS
TT
STT
TSTT


GGGTT
Template Predicted Secondary structure  ......................





































Template SS confidence 















































































   66...70.........80.........90.........100.........110.........120...
 
   207..210........ .220.........230.........240.........250.......
Predicted Secondary structure  ....











Query SS confidence 











. . . .






































Query Sequence  HTNVAIARHMYE. . . . SALHILRRKYDEWQPRVLTCSALEKRGIDEIWHAIIDFK
Query Conservation              ....  
             

 


  
 

 

   
    
Alig confidence 











....






































Template Conservation                                    
 


 
 

 
 
  
 
 
Template Sequence  DEHTRRELAKMKQEPVRSEEGRDMANRISAFGYLECSAKTKEGVREVFEMATRAG
Template Known Secondary structure 
TTT




TT
S

TTT
TT
Template Predicted Secondary structure 


















Template SS confidence 






















































   124.....130.........140.........150.........160.........170........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions