Return to main results Retrieve Phyre Job Id

Job DescriptionP27254
Confidence99.27%DateThu Jan 5 11:43:35 GMT 2012
Rank163Aligned Residues156
% Identity18%Templated1tada2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   52.......60.........70.........80.........90.........100.........110.........120.........130.
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Query Sequence  GNTLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSILGDKTRMNDLARAEAAFIRPVPSSGHLGGA
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Template Sequence  ARTVKLLLLGAGESGKSTIVKQMK. . . . . . . . . . . . IIHQDGTGII. . . . . . . . . . . ETQFSFKDLNFRMFDVGGQRS. .
Template Known Secondary structure 

STTSS............S




...........TT


S..
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   27..30.........40.........50 .........60 .........70.........80.
 
   132.......140.........150.........160.........170.........180. ........190..
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Query Sequence  SQRARELMLLCEAAGYDVVIVETVGVGQSETEVARMVDCFISLQIAGGGD. . . . . . . . . . . . . . . . . . . DLQGIKKGLME
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . ERKKWIHCFEGVTCIIFIAALSAYDMVLVEDDEVNRMHESLHLFNSICNHRYFAT
Template Known Secondary structure  .........................TTGGGG
TT
SGGGGG
B
SS
TTSBT
GGGTT
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   203......210.........220.........230.........240.........250.......
 
   193......200.... .....210.........220.........230.........240.........250.....
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Query Sequence  VADLIVINKDDG. . . . . . . . . . . . . . . . . DNHTNVAIARHMYESALHILRRKYDEWQPRVLTCSALEKRGIDEIWHAIID
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Template Sequence  TSIVLFLNKKDVFSEKIKKAHLSICFPDYNGPNTYEDAGNYIKVQFLELNMRRDVKEIYSHMTCATDTQNVKFVFDAVTD
Template Known Secondary structure  S
TTTS
GGGT
TT

S


TT
TTTTTS



TT
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   258.260.........270.........280.........290.........300.........310.........320.........330.......
 
   256.
Predicted Secondary structure 
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Query Sequence  FK
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Template Conservation   
Template Sequence  II
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 

   338.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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