Return to main results Retrieve Phyre Job Id

Job DescriptionP27254
Confidence99.53%DateThu Jan 5 11:43:35 GMT 2012
Rank106Aligned Residues161
% Identity17%Templated1jala1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   54.....60.........70.........80.... .....90.........100.........110.........120...
Predicted Secondary structure 










..........





















Query SS confidence 






























. . . . . . . . . .






































Query Sequence  TLRLGVTGTPGAGKSTFLEAFGMLLIREGLK. . . . . . . . . . VAVIAVDPSSPVTGGSILGDKTRMNDLARAEAAFIRPVP
Query Conservation     


 
 









 
       
  ..........



  

 

         
             
    
Alig confidence 





















......


..........










.........


















Template Conservation     




 







 



......
    

  
  

  
     

.........              
 


Template Sequence  GFKCGIVGLPNVGKSTLFNALT. . . . . . KAGPFCTIEPNTGVVPMPDPRLDA. . . . . . . . . LAEIVKPERILPTTMEFVD
Template Known Secondary structure 



TTSS......T








SS


.........

S




Template Predicted Secondary structure 





......
















.........

Template SS confidence 















































































   2.......10.........20... ......30.........40....... ..50.........60......
 
   124.....130.........140.........150.........160.........170.........180 .........190.........
Predicted Secondary structure 






















....



Query SS confidence 
























































. . . .


















Query Sequence  SSGHLGGASQRARELMLLCEAAGYDVVIVETVGVGQSETEVARMVDCFISLQIAGGG. . . . DDLQGIKKGLMEVADLIVI
Query Conservation 
 
                     
  


  
            
    
      ....               


 
Alig confidence 










....................

























....


















Template Conservation 



       ....................       
     




 



               

         
Template Sequence  IAGLVAGASKG. . . . . . . . . . . . . . . . . . . . EGLGNKFLANIRETDAIGHVVRCFENIDPLDDIDTINTELALADLDSCE
Template Known Secondary structure 

S

TT....................GGGT

T
S
S



Template Predicted Secondary structure 









....................










Template SS confidence 















































































   73......80... ......90.........100.........110.........120.........130..
 
   200.........210.........220.........230.........240.........
Predicted Secondary structure 

















Query SS confidence 

















































Query Sequence  NKDDGDNHTNVAIARHMYESALHILRRKYDEWQPRVLTCSALEKRGIDEI
Query Conservation 

 
                 
             

 


  
 

 

Alig confidence 

















































Template Conservation                                                   
Template Sequence  RAIQRLQKRAKGGDKEAKFELSVMEKILPVLENAGMIRSVGLDKEELQAI
Template Known Secondary structure  TTT
TT

GGGS


Template Predicted Secondary structure 









Template SS confidence 

















































   142.......150.........160.........170.........180.........190.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions