Return to main results Retrieve Phyre Job Id

Job DescriptionP27254
Confidence98.95%DateThu Jan 5 11:43:35 GMT 2012
Rank252Aligned Residues155
% Identity17%Templated1azta2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   54.....60.........70.........80.........90.........100.........110.........120.........130...
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  TLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSILGDKTRMNDLARAEAAFIRPVPSSGHLGGASQ
Query Conservation     


 
 









 
       
  



  

 

         
             
    
 
       
Alig confidence 





















...........










...........




















....
Template Conservation    





   






  
 ...........
    

 
  ...........            
 
 


  ....
Template Sequence  THRLLLLGAGESGKSTIVKQMR. . . . . . . . . . . ILHVVLTSGIF. . . . . . . . . . . ETKFQVDKVNFHMFDVGGQRD. . . .
Template Known Secondary structure  S
STTSS...........




S
...........TT


STT....
Template Predicted Secondary structure 








...........






...........





....
Template SS confidence 















































































   40.........50.........60. ........70.. .......80.........90...
 
   134.....140.........150.........160.........170.........180. ........190....
Predicted Secondary structure 















...................



Query SS confidence 















































. . . . . . . . . . . . . . . . . . .












Query Sequence  RARELMLLCEAAGYDVVIVETVGVGQSETEVARMVDCFISLQIAGGGD. . . . . . . . . . . . . . . . . . . DLQGIKKGLMEVA
Query Conservation                
  


  
            
    
       ...................             
Alig confidence  .......................
























...................












Template Conservation  ....................... 
  
    
    



  

  
    
    


 


 

  
          
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . ERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTIS
Template Known Secondary structure  .......................TTTGGGGG
TT
STTGGG
B
TTTS
SBT
GGGSS
Template Predicted Secondary structure  .......................

























Template SS confidence 















































































   230.........240.........250.........260.........270.........280......
 
   195....200..... ....210.........220.........230...... ...240
Predicted Secondary structure 




................................






..
Query SS confidence 










. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .






























. .



Query Sequence  DLIVINKDDGD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NHTNVAIARHMYESALHILRRKYDEWQPRVL. . TCSA
Query Conservation   


 

 
  ................................               
             

.. 


Alig confidence 










................................






























..



Template Conservation 



 

 

   

          

 
                         
   
              
 
 
 
Template Sequence  VILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCA
Template Known Secondary structure 

SS

GGGGG



TT



TT

TSS
TTS



T
Template Predicted Secondary structure 


































Template SS confidence 















































































   287..290.........300.........310.........320.........330.........340.........350.........360......
 
   241........250.......
Predicted Secondary structure 




Query SS confidence 
















Query Sequence  LEKRGIDEIWHAIIDFK
Query Conservation    
 

 

   
    
Alig confidence 
















Template Conservation   
   
  

  
 
 
Template Sequence  VDTENIRRVFNDCRDII
Template Known Secondary structure  T
TT
Template Predicted Secondary structure 
Template SS confidence 
















   367..370.........380...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions