Job Description P27254 Confidence 98.32% Date Thu Jan 5 11:43:35 GMT 2012 Rank 296 Aligned Residues 78 % Identity 21% Template c4a2iV_ PDB info PDB header:ribosome/hydrolase Chain: V: PDB Molecule:putative ribosome biogenesis gtpase rsga; PDBTitle: cryo-electron microscopy structure of the 30s subunit in complex with2 the yjeq biogenesis factor Resolution 16.50 Å

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		168	.	170	.	.	.	.	.	.	.	.	.	180						.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure															.	.	.	.	.
Query SS confidence															.	.	.	.	.
Query Sequence		V	D	C	F	I	S	L	Q	I	A	G	G	G	.	.	.	.	.	D	D	L	Q	G	I	K	K	G	L	M	E	V	A	D	L	I	V	I	N	K	D	D	G	D	N	H	T	N	V	A	I	A	R	H	M	Y	E	S	A	L	H	I	L	R	R	K	Y	D	E	W	Q	P	R	V	L	T	C	S	A	L	E
Query Conservation															.	.	.	.	.
Alig confidence															.	.	.	.	.																																							.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.
Template Sequence		I	D	Q	I	V	I	V	S	A	I	L	P	E	L	S	L	N	I	I	D	R	Y	L	V	G	C	E	T	L	Q	V	E	P	L	I	V	L	N	K	I	D	L	L	D	D	E	G	M	D	F	V	N	E	Q	M	D	.	.	.	.	.	.	.	.	I	Y	R	N	I	G	Y	R	V	L	M	V	S	S	H	T
Template Known Secondary structure											S	T	T	T																	T										G	G	G															.	.	.	.	.	.	.	.				T	T	T							B	T	T	T
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.									.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		243	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	G	I	D	E	I	W	H	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	D	G	L	K	P	L	E	E	A	L
Template Known Secondary structure		T	B	T
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions