Job Description P27254 Confidence 99.74% Date Thu Jan 5 11:43:35 GMT 2012 Rank 40 Aligned Residues 157 % Identity 25% Template c3qq5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:small gtp-binding protein; PDBTitle: crystal structure of the [fefe]-hydrogenase maturation protein hydf Resolution 2.99 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	C	G	N	T	L	R	L	G	V	T	G	T	P	G	A	G	K	S	T	F	L	E	A	F	G	M	L	L	I	R	E	G	L	K	V	A	V	I	A	V	D	P	S	S	P	V	T	G	G	S	I	L	G	D	K	T	R	M	N	D	L	A	R	A	E	A	A	F	I	R	P	V	P	S	S	G	H	L	G
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	G	F	R	R	Y	I	V	V	A	G	R	R	N	V	G	K	S	S	F	M	N	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	T	D	P	V	Y	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	M	E	L	H	P	I	G	P	V	T	L	V	D	T	P	G	L	D	D
Template Known Secondary structure														S		S	T	T	T	T	T	T	T	T	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	T									S	S	T	T
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.														.	.	.	30	.	.	.	.															.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.
Query SS confidence																																																											.	.
Query Sequence		G	A	S	Q	R	A	R	E	L	M	L	L	C	E	A	A	G	Y	D	V	V	I	V	E	T	V	G	V	G	Q	S	E	T	E	V	A	R	M	V	D	C	F	I	S	L	Q	I	A	G	G	G	D	D	L	Q	G	I	.	.	K	K	G	L	M	E	V	A	D	L	I	V	I	N	K	D	D	G	D	N	H
Query Conservation																																																											.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	G	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	L	R	V	E	K	A	R	R	V	F	Y	R	A	D	C	G	I	L	V	T	D	S	A	P	T	P	Y	E	D	D	V	V	N	L	F	K	E	M	E	I	P	F	V	V	V	V	N	K	I	D	V	L	G	E
Template Known Secondary structure				T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	S		S							S	S	S															T	T											T	T	T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		71	.	.	.																					.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	V	A	I	A	R	H	M	Y	E	S	A	L	H	I	L	R	R	K	Y	D	E	W	Q	P	R	V	L	T	C	S	A	L	E	K	R	G	I	D	E	I	W	H	A	I	I	D	F	K	T	A	L	T	A	S	G
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	A	E	.	.	.	.	.	.	.	.	.	.	.	E	L	K	G	L	Y	E	S	R	Y	E	A	K	V	L	L	V	S	A	L	Q	K	K	G	F	D	D	I	G	K	T	I	S	E	I	L	P	G	D	E	E	I	P
Template Known Secondary structure				T	.	.	.	.	.	.	.	.	.	.	.						S	S			T	T							S	S			T	T	S	T	T	T									S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		131	.	.												.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions