Job Description P27254 Confidence 99.45% Date Thu Jan 5 11:43:35 GMT 2012 Rank 124 Aligned Residues 163 % Identity 14% Template c3o47A_ PDB info PDB header:hydrolase, hydrolase activator Chain: A: PDB Molecule:adp-ribosylation factor gtpase-activating protein 1, adp- PDBTitle: crystal structure of arfgap1-arf1 fusion protein Resolution 2.80 Å

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	P	Y	C	G	N	T	L	R	L	G	V	T	G	T	P	G	A	G	K	S	T	F	L	E	A	F	G	M	L	L	I	R	E	G	L	K	V	A	V	I	A	V	D	P	S	S	P	V	T	G	G	S	I	L	G	D	K	T	R	M	N	D	L	A	R	A	E	A	A	F	I	R	P	V	P	S	S	G	H
Query Conservation
Alig confidence																														.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	P	P	Q	K	K	E	M	R	I	L	M	V	G	L	D	A	A	G	K	T	T	I	L	Y	K	L	K	.	.	.	.	.	.	L	G	E	I	V	T	T	I	P	T	I	G	F	N	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	T	V	E	Y	K	N	I	S	F	T	V	W	D	V	G	R	P
Template Known Secondary structure								S								S	T	T	S	S								T		.	.	.	.	.	.	S	S									T	T			.	.	.	.	.	.	.	.	.	.	.	.	.							T	T
Template Predicted Secondary structure																														.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.							.	.	.	.	.	.	.	170	.	.	.	.	.	.														.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	G	A	S	Q	R	A	R	E	L	M	L	L	C	E	A	A	G	Y	D	V	V	I	V	E	T	V	G	V	G	Q	S	E	T	E	V	A	R	M	V	D	C	F	I	S	L	Q	I	A	G	G	G	D	D	L	Q	G	I	K	K	G	L	M	E	V	A	D	L	I	V	I	N	K	D	D	G	D	N	H
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	.	.	.	.	.	.	.	.	.	W	R	H	Y	F	Q	N	T	Q	G	L	I	F	V	V	D	S	N	D	R	E	R	V	N	E	A	R	E	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	R	M	L	A	E	D	E	L	R	D	A	V	L	L	V	F	A	N	K	Q	D	L	P	N	A
Template Known Secondary structure		S	.	.	.	.	.	.	.	.	.						T	T										T	T		S	S	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.					T		G	G	G	T	T										T	T	S	T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		207										.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.															.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	V	A	I	A	R	H	M	Y	E	S	A	L	H	I	L	R	R	K	Y	D	E	W	Q	P	R	V	L	T	C	S	A	L	E	K	R	G	I	D	E	I	W	H	A	I	I	D	F	K	T
Query Conservation
Alig confidence												.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.
Template Sequence		M	N	A	A	E	I	T	D	K	L	.	.	.	.	.	.	G	L	H	S	L	R	H	R	N	W	Y	I	Q	A	T	C	A	T	S	G	D	G	L	Y	E	G	L	D	W	L	S	N	Q	L	R
Template Known Secondary structure												.	.	.	.	.	.	T		T	T			S	S								B	T	T	T	T	B	T													T
Template Predicted Secondary structure												.	.	.	.	.	.
Template SS confidence
		264	.	.	.	.	.	270	.	.	.							.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions