Job Description P27254 Confidence 100.00% Date Thu Jan 5 11:43:35 GMT 2012 Rank 3 Aligned Residues 302 % Identity 42% Template c3nxsA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:lao/ao transport system atpase; PDBTitle: crystal structure of lao/ao transport system from mycobacterium2 smegmatis bound to gdp Resolution 2.30 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	E	S	I	R	R	L	R	Q	G	E	R	A	T	L	A	Q	A	M	T	L	V	E	S	R	H	P	R	H	Q	A	L	S	T	Q	L	L	D	A	I	M	P	Y	C	G	N	T	L	R	L	G	V	T	G	T	P	G	A	G	K	S	T	F	L	E	A	F	G	M	L	L	I	R	E	G	L	K	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	H	E	L	A	Q	S	I	R	D	G	D	R	S	A	L	A	R	A	I	T	L	V	E	S	T	R	A	D	H	R	E	Q	A	Q	Q	L	L	L	D	L	M	P	E	A	G	S	A	M	H	V	G	I	T	G	V	P	G	V	G	K	S	T	T	I	E	A	L	G	M	H	L	I	E	A	G	H	R	V	A
Template Known Secondary structure												T																S														T	T	T	T	T	T		S									T	T	S																T	T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	A	V	D	P	S	S	P	V	T	G	G	S	I	L	G	D	K	T	R	M	N	D	L	A	R	A	E	A	A	F	I	R	P	V	P	S	S	G	H	L	G	G	A	S	Q	R	A	R	E	L	M	L	L	C	E	A	A	G	Y	D	V	V	I	V	E	T	V	G	V	G	Q	S	E	T	E	V	A	R
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	A	V	D	R	M	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	V	H	P	D	A	Y	I	R	P	S	P	T	S	G	T	L	G	G	V	A	K	A	T	R	E	T	I	V	L	L	E	A	A	G	Y	D	V	I	L	V	E	T	V	G	V	G	Q	S	E	V	T	V	A	G
Template Known Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T										S																			T	T												T	T							T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.																.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	D	C	F	I	S	L	Q	I	A	G	G	G	D	D	L	Q	G	I	K	K	G	L	M	E	V	A	D	L	I	V	I	N	K	D	D	G	D	N	H	T	N	V	A	I	A	R	H	M	Y	E	S	A	L	H	I	L	R	R	K	Y	D	E	W	Q	P	R	V	L	T	C	S	A	L	E	K	R	G	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	V	D	T	F	V	F	L	T	L	A	R	T	G	D	Q	L	Q	G	I	K	K	G	V	L	E	L	A	D	V	I	V	V	N	K	A	D	G	E	H	A	V	E	A	K	A	A	A	R	E	L	S	G	A	I	R	L	I	Y	P	R	E	S	L	W	R	P	P	V	L	T	M	S	A	V	E	G	T	G	L
Template Known Secondary structure		T		S									S	S	S	S							T	T		G	G	G		S									G	G	G																			S		T	T		S										T	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	I	W	H	A	I	I	D	F	K	T	A	L	T	A	S	G	R	L	Q	Q	V	R	Q	Q	Q	S	V	E	W	L	R	K	Q	T	E	E	E	V	L	N	H	L	F	A	N	E	D	F	D	R	Y	Y	R	Q	T	L	L	A	V	K	N	N	T	L	S	P	R	T	G	L	R	Q	L	S	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	E	L	W	E	T	V	L	R	H	R	E	V	L	E	E	A	G	E	F	E	A	R	R	R	T	Q	Q	V	E	W	T	W	S	M	V	R	D	A	V	L	D	R	V	M	N	H	P	E	V	R	R	I	R	D	D	V	E	Q	R	V	R	L	G	E	L	T	P	A	L	A	A	Q	E	I	L	D
Template Known Secondary structure																		T	T																												T																	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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