Job Description P27254 Confidence 99.53% Date Thu Jan 5 11:43:35 GMT 2012 Rank 105 Aligned Residues 167 % Identity 15% Template c3lxxA_ PDB info PDB header:immune system Chain: A: PDB Molecule:gtpase imap family member 4; PDBTitle: crystal structure of human gtpase imap family member 4 Resolution 2.15 Å

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	L	G	V	T	G	T	P	G	A	G	K	S	T	F	L	E	A	F	G	M	L	L	I	R	E	G	L	K	V	A	V	I	A	V	D	P	S	S	P	V	T	G	G	S	I	L	G	D	K	T	R	M	N	D	L	A	R	A	E	A	A	F	I	R	P	V	P	S	S	G	H	L	G	G	A	S	Q	R
Query Conservation
Alig confidence																							.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	R	I	V	L	V	G	K	T	G	A	G	K	S	A	T	G	N	S	I	L	.	.	.	.	.	.	G	R	K	V	F	H	S	T	K	K	C	E	K	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S	W	K	E	T	E	L	V	V	V	D	T	P	G	I	F	N	A	E	T	S	K
Template Known Secondary structure										T	T	S	S										.	.	.	.	.	.	T	S			S					S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T										S
Template Predicted Secondary structure																							.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.							.	.	.	.	.	.	.	.	60	.	.	.	.	.																.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	E	L	M	L	L	C	E	A	A	G	Y	D	V	V	I	V	E	T	V	G	V	G	Q	S	E	T	E	V	A	R	M	V	D	C	F	I	S	L	Q	I	A	G	G	G	D	D	L	Q	G	I	K	K	G	L	M	E	V	A	D	L	I	V	I	N	K	D	D	G	D	N	H	T	N	V	A	I	A	R
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Template Sequence		E	I	I	R	C	I	L	L	T	S	P	G	P	H	A	L	L	L	V	V	P	L	G	R	Y	T	E	E	E	H	K	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	I	L	K	X	F	G	E	R	A	R	S	F	X	I	L	I	F	T	R	K	D	D	L	P	.	.	.	.	.	.	.	.
Template Known Secondary structure										T	T	T			S								T	T			S	S							.	.	.	.	.	.	.	.	.	.	.	.	.												G	G	G								G	G	G			.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.														.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	M	Y	E	S	A	L	H	I	L	R	R	K	Y	D	E	W	Q	P	R	V	L	T	C	S	A	L	E	K	R	G	I	D	E	I	W	H	A	I	I	D	F	K	T	A	L	T	A	S	G	R
Query Conservation
Alig confidence																					.	.
Template Conservation																					.	.
Template Sequence		E	D	I	Q	D	L	X	D	I	F	G	D	R	Y	C	A	L	N	N	.	.	K	A	T	G	A	E	Q	E	A	Q	R	A	Q	L	L	G	L	I	Q	R	V	V	R	E	N	K	E	G	C	Y
Template Known Secondary structure												S	S	S						T	.	.	T																									T	T	S
Template Predicted Secondary structure																					.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.			.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions