Job Description P27254 Confidence 99.58% Date Thu Jan 5 11:43:35 GMT 2012 Rank 89 Aligned Residues 200 % Identity 14% Template c3lxwA_ PDB info PDB header:immune system Chain: A: PDB Molecule:gtpase imap family member 1; PDBTitle: crystal structure of human gtpase imap family member 1 Resolution 2.21 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		N	T	L	R	L	G	V	T	G	T	P	G	A	G	K	S	T	F	L	E	A	F	G	M	L	L	I	R	E	G	L	K	V	A	V	I	A	V	D	P	S	S	P	V	T	G	G	S	I	L	G	D	K	T	R	M	N	D	L	A	R	A	E	A	A	F	I	R	P	V	P	S	S	G	H	L	G	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																									.	.	.	.	.	.					.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.																							.	.	.
Template Conservation																									.	.	.	.	.	.					.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.
Template Sequence		S	T	R	R	L	I	L	V	G	R	T	G	A	G	K	S	A	T	G	N	S	I	L	.	.	.	.	.	.	G	Q	R	R	.	.	.	.	.	.	.	.	F	T	R	A	C	.	.	.	.	.	.	.	.	.	T	T	G	S	R	R	W	D	K	C	H	V	E	V	V	D	T	P	D	I	F	S	S	Q	V
Template Known Secondary structure										S	S	T	T	S	S										.	.	.	.	.	.	T	S			.	.	.	.	.	.	.	.				S		.	.	.	.	.	.	.	.	.								T	T										S		S	S	T	T
Template Predicted Secondary structure																									.	.	.	.	.	.					.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.							.	50	.	.									.	.	.	.	.										.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
							130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	G	A	S	Q	R	A	R	E	L	M	L	L	C	E	A	A	G	Y	D	V	V	I	V	E	T	V	G	V	G	Q	S	E	T	E	V	A	R	M	V	D	C	F	I	S	L	Q	I	A	G	G	G	D	D	L	Q	G	I	K	K	G	L	M	E	V	A	D	L	I	V	I	N	K	D	D	G
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	K	T	D	P	G	C	E	E	R	G	H	C	Y	L	L	S	A	P	G	P	H	A	L	L	L	V	T	Q	L	G	R	F	T	A	Q	D	Q	Q	A	V	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	V	R	D	M	F	G	E	D	V	L	K	W	M	V	I	V	F	T	R	K	E	D
Template Known Secondary structure					S	T	T	S											T	T			S								T	T	B											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								G	G	G	G	G	G								G	G	G
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.																.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.				.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260							.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure																																			.	.	.																								.	.	.	.	.	.
Query SS confidence																																			.	.	.																								.	.	.	.	.	.
Query Sequence		D	N	H	T	N	V	A	I	A	R	H	M	Y	E	S	A	L	H	I	L	R	R	K	Y	D	E	W	Q	P	R	V	L	T	.	.	.	C	S	A	L	E	K	R	G	I	D	E	I	W	H	A	I	I	D	F	K	T	A	L	.	.	.	.	.	.	T	A	S	G	R	L	Q	Q	V	R	Q	Q	Q	S	V
Query Conservation																																			.	.	.																								.	.	.	.	.	.
Alig confidence																																			.	.	.																								.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	G	G	S	L	H	D	Y	V	S	N	T	E	N	R	A	L	R	E	L	V	A	E	C	G	G	R	V	C	A	F	D	N	R	A	T	G	R	E	Q	E	A	Q	V	E	Q	L	L	G	M	V	E	G	L	V	L	E	H	K	G	A	H	Y	S	N	E	V	Y	E	L	A	Q	V	L	R	W	A	G	P
Template Known Secondary structure		G	T	T																						T	T	T							T	T																								T	T	T														G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		E	W	L	R	K	Q	T	E	E	E	V	L	N	H	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	R	L	R	R	V	A	E	R	V	A	A	R	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions