Job Description P27254 Confidence 99.77% Date Thu Jan 5 11:43:35 GMT 2012 Rank 32 Aligned Residues 153 % Identity 16% Template c3lx8A_ PDB info PDB header:metal transport Chain: A: PDB Molecule:ferrous iron uptake transporter protein b; PDBTitle: crystal structure of gdp-bound nfeob from s. thermophilus Resolution 2.90 Å

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.					.	.	130
Predicted Secondary structure																																																																											.	.	.	.
Query SS confidence																																																																											.	.	.	.
Query Sequence		L	R	L	G	V	T	G	T	P	G	A	G	K	S	T	F	L	E	A	F	G	M	L	L	I	R	E	G	L	K	V	A	V	I	A	V	D	P	S	S	P	V	T	G	G	S	I	L	G	D	K	T	R	M	N	D	L	A	R	A	E	A	A	F	I	R	P	V	P	S	S	G	H	.	.	.	.	L	G	G
Query Conservation																																																																											.	.	.	.
Alig confidence																							.	.	.	.	.	.						.											.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Conservation																							.	.	.	.	.	.						.											.	.	.	.	.	.	.	.	.	.
Template Sequence		T	E	I	A	L	I	G	N	P	N	S	G	K	T	S	L	F	N	L	I	T	.	.	.	.	.	.	G	H	N	Q	R	.	V	G	N	W	P	G	V	T	V	E	.	.	.	.	.	.	.	.	.	.	R	K	S	G	L	V	K	K	N	K	D	L	E	I	Q	D	L	P	G	I	Y	S	M	S	P	Y	S
Template Known Secondary structure									S	T	T	S	S										.	.	.	.	.	.	T	T				.					T	T	S	S	S		.	.	.	.	.	.	.	.	.	.							S	S		T	T										S	S			S	S	S
Template Predicted Secondary structure																							.	.	.	.	.	.						.											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.							.	.	.	.	.		.	.	30	.	.	.	.	.	.	.											.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	Q	R	A	R	E	L	M	L	L	C	E	A	A	G	Y	D	V	V	I	V	E	T	V	G	V	G	Q	S	E	T	E	V	A	R	M	V	D	C	F	I	S	L	Q	I	A	G	G	G	D	D	L	Q	G	I	K	K	G	L	M	E	V	A	D	L	I	V	I	N	K	D	D	G	D	N	H	T	N	V
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	E	E	K	V	A	R	D	Y	L	L	S	Q	R	A	D	S	I	L	N	V	V	D	A	T	N	L	E	R	N	L	Y	L	T	T	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	E	T	G	I	P	V	T	I	A	L	N	M	I	D	V	L	D	G	Q	G	K
Template Known Secondary structure													T	T			S								S	T	T											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	S	S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100																						.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	A	R	H	M	Y	E	S	A	L	H	I	L	R	R	K	Y	D	E	W	Q	P	R	V	L	T	C	S	A	L	E	K	R	G	I	D	E	I	W	H	A	I	I	D
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	N	V	D	K	L	S	Y	H	L	G	.	.	.	.	.	.	.	.	.	.	V	P	V	V	A	T	S	A	L	K	Q	T	G	V	D	Q	V	V	K	K	A	A	H
Template Known Secondary structure													T	.	.	.	.	.	.	.	.	.	.	S						B	T	T	T	T	B	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.											.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions