Job Description P27254 Confidence 97.97% Date Thu Jan 5 11:43:35 GMT 2012 Rank 332 Aligned Residues 162 % Identity 15% Template c3l2oB_ PDB info PDB header:protein binding/cell cycle Chain: B: PDB Molecule:f-box only protein 4; PDBTitle: structure-based mechanism of dimerization-dependent ubiquitination by2 the scffbx4 ubiquitin ligase Resolution 2.80 Å

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		52	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		G	N	T	L	R	L	G	V	T	G	T	P	.	G	A	G	K	S	T	F	L	E	A	F	G	M	L	L	I	R	E	G	L	K	V	A	V	I	A	V	D	P	S	S	P	V	T	G	G	S	I	L	G	D	K	T	R	M	N	D	L	A	R	A	E	A	A	F	I	R	P	V	P	S	S	G	H	L	G	G
Query Conservation														.
Alig confidence														.													.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation																											.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Sequence		Q	N	E	P	R	F	A	M	F	G	P	G	L	E	E	L	N	T	S	L	V	L	S	L	M	.	.	.	.	.	S	S	E	E	L	C	P	T	A	G	L	P	Q	R	Q	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	G	S	G	V	N	F	Q	L	N	N	Q	H	K	F	.	.	.
Template Known Secondary structure												T					S	S	S							T	.	.	.	.	.	T		G	G	G							S	T	T	T		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S									T	T	T				.	.	.
Template Predicted Secondary structure																											.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.						.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.															.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.				.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.													.	.	.	190	.	.	.	.	.
Predicted Secondary structure																												.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	S	Q	R	A	R	E	L	M	L	L	C	E	A	A	G	Y	D	V	V	I	V	E	T	V	G	.	.	.	V	G	Q	S	E	T	E	V	A	R	M	V	D	C	F	I	S	L	Q	I	A	G	G	G	D	D	L	Q	G	I	.	.	.	.	.	.	.	.	.	.	.	.	K	K	G	L	M	E	V	A	D
Query Conservation																												.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	L	I	L	Y	S	T	T	R	R	Y	S	V	I	P	Q	I	Q	K	V	C	E	V	V	D	G	F	I	Y	V	A	N	A	E	A	H	K	R	H	E	W	Q	D	E	F	S	H	I	M	A	M	T	D	P	A	F	G	S	S	G	R	P	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S																				S							B		B	T	T																							T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		196	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		L	I	V	I	N	.	K	D	D	G	D	N	H	T	N	V	A	I	A	R	H	M	Y	E	S	A	L	H	I	L	R	R	K	Y	D	E	W	Q	P	R	V	L	T	C	S	A	L	E	K	R	G	I	D	E	I	W	H	A	I	I	D	F	K	T
Query Conservation							.
Alig confidence							.										.	.	.	.														.	.	.
Template Conservation																	.	.	.	.														.	.	.
Template Sequence		L	V	L	S	C	I	S	Q	G	D	V	K	R	M	P	.	.	.	.	C	F	Y	L	A	H	E	L	H	L	N	L	L	.	.	.	N	H	P	W	L	V	Q	D	T	E	A	E	T	L	T	G	F	L	N	G	I	E	W	I	L	E	E	V	E
Template Known Secondary structure								S	S	T	T	S		B			.	.	.	.								T	T	G	G	G	G	.	.	.		S									T	T	T		T	T												S
Template Predicted Secondary structure																	.	.	.	.														.	.	.
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340					.	.	.	.	.	.	.	.	.	350	.	.	.				.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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