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Job DescriptionP27254
Confidence98.20%DateThu Jan 5 11:43:35 GMT 2012
Rank308Aligned Residues150
% Identity14%Templatec3k9gA_
PDB info PDB header:biosynthetic proteinChain: A: PDB Molecule:pf-32 protein; PDBTitle: crystal structure of a plasmid partition protein from borrelia2 burgdorferi at 2.25a resolution, iodide soak
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   53......60 .........70.........80.........90.........100 .........110..
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Query Sequence  NTLRLGVT. GTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGS. . . . . . . . . . . . . . . . . . . ILGDKTRMNDLA
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Template Sequence  KPKIITIASIKGGVGKSTSAIILATLLSK. NNKVLLIDMDTQASITSYFYEKIEKLGINFTKFNIYEILKENVDIDSTII
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SSSSS
TT.TS

TT
TTT

TTTSSTTSS
GGGG
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   5....10.........20.........30... ......40.........50.........60.........70.........80...
 
   113......120...... ...130.........140.........150....... ..160.........170.........180
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Query Sequence  RAEAAFIRPVPSSG. . . . . . HLGGASQRARELMLLCEAAGYDVVIVETVGV. GQSETEVARMVDCFISLQIAGGG. . . . .
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Template Sequence  NVDNNLDLIPSYLTLHNFSEDKIEHKDFLLKTSLGTLYYKYDYIVIDTNPSLDVTLKNALLCSDYVIIPMTAEKWAVESL
Template Known Secondary structure  TT


GGGGGTTT


TTGGGTT
TT
S
SS
STT
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TT
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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   181........190.........200...
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Query Sequence  . DDLQGIKKGLMEVADLIVINKDD
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Template Sequence  DLFNFFVRKLNLFLPIFLIITRFK
Template Known Secondary structure  TTT




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   164.....170.........180.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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