Job Description P27254 Confidence 99.91% Date Thu Jan 5 11:43:35 GMT 2012 Rank 11 Aligned Residues 204 % Identity 17% Template c3ievA_ PDB info PDB header:nucleotide binding protein/rna Chain: A: PDB Molecule:gtp-binding protein era; PDBTitle: crystal structure of era in complex with mggnp and the 3' end of 16s2 rrna Resolution 1.90 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		N	T	L	R	L	G	V	T	G	T	P	G	A	G	K	S	T	F	L	E	A	F	G	M	L	L	I	R	E	G	L	K	V	A	V	I	A	V	D	P	S	S	P	V	T	G	G	S	I	L	G	D	K	T	R	M	N	D	L	A	R	.	A	E	A	A	F	I	R	P	V	P	S	S	G	H	L	G	G	A
Query Conservation																																																															.
Alig confidence																									.	.	.	.	.	.															.	.	.	.	.	.	.	.	.										.
Template Conservation																									.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Template Sequence		K	V	G	Y	V	A	I	V	G	K	P	N	V	G	K	S	T	L	L	N	N	L	L	.	.	.	.	.	.	G	T	K	V	S	I	I	S	P	K	A	G	T	T	.	.	.	.	.	.	.	.	.	R	M	R	V	L	G	V	K	N	I	P	N	E	A	Q	I	I	F	L	D	T	P	G	I	Y	E	P	K
Template Known Secondary structure											S	T	T	S	S										.	.	.	.	.	.	T	S			S				S	S	S				.	.	.	.	.	.	.	.	.		S									T	T	T
Template Predicted Secondary structure																									.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.							.	.	.	.	.	30	.	.	.	.	.	.	.	.										.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180						.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.
Query Sequence		S	Q	R	A	R	E	L	M	L	L	C	E	A	A	G	Y	D	V	V	I	V	E	T	V	G	V	G	Q	S	E	T	E	V	A	R	M	V	D	C	F	I	S	L	Q	I	A	G	G	G	.	.	.	.	.	D	D	L	Q	G	I	K	K	G	L	M	E	V	A	D	L	I	V	I	N	K	D	D	G	D	N
Query Conservation																																																			.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	S	D	V	L	G	H	S	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	I	A	K	Q	S	L	E	E	A	D	V	I	L	F	M	I	D	A	T	E	G	W	R	P	R	D	E	E	I	Y	Q	N	F	I	K	P	L	N	K	P	V	I	V	V	I	N	K	I	D	K	I	G
Template Known Secondary structure		T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												S								T	T	T	B	S												T	G	G	G											G	G	G	S	S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.																		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	N	V	A	I	A	R	H	M	Y	E	S	A	L	H	I	L	R	R	K	Y	D	E	W	Q	P	R	V	L	T	C	S	A	L	E	K	R	G	I	D	E	I	W	H	A	I	I	D	F	K	T	A	L	T	A	S	G	R	L	Q	Q	V	R	Q	Q	Q	S	V	E	W	L	R	K	Q	T	E	E	E	V
Query Conservation
Alig confidence																	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.
Template Sequence		P	A	K	N	V	L	P	L	I	D	E	I	H	K	K	.	.	.	.	.	.	.	H	P	E	L	T	E	I	V	P	I	S	A	L	K	G	A	N	L	D	E	L	V	K	T	I	L	K	Y	L	P	E	G	E	P	L	F	P	E	D	M	I	T	D	L	P	L	R	L	L	A	A	E	I	V	R	E	K	A
Template Known Secondary structure		S	G	G	G	G											.	.	.	.	.	.	.		T	T								B	T	T	T	T	B	S												S		B				S	S		T	T			B
Template Predicted Secondary structure																	.	.	.	.	.	.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.								.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		287	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	H	L	F	A	N	E	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	M	L	T	R	E	E	V	P
Template Known Secondary structure				T			T	T
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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