Return to main results Retrieve Phyre Job Id

Job DescriptionP27254
Confidence98.39%DateThu Jan 5 11:43:35 GMT 2012
Rank293Aligned Residues214
% Identity19%Templatec3ibgF_
PDB info PDB header:hydrolaseChain: F: PDB Molecule:atpase, subunit of the get complex; PDBTitle: crystal structure of aspergillus fumigatus get3 with bound2 adp
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   44.....50.........60.........70.........80.........90.........100.........110.........120...
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  LDAIMPYCGNTLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSILGDKTRMNDLARAEAAFIRPVP
Query Conservation 
            


 
 









 
       
  



  

 

         
             
    
Alig confidence 




.









































































Template Conservation       .     


  











 


  

  
 





 
    
   

                      
Template Sequence  LQSIL. SQKTLRWIFVGGKGGVGKTTTSCSLAIQLAKVRKSVLLISTDPAHNLSDAFGQKFGKEARLVDGYSNLSAMEID
Template Known Secondary structure  S.T
SS



SSSSTTSS


TT
TS


SS

TT
SS

Template Predicted Secondary structure 
.



































Template SS confidence 















































































   17..20. ........30.........40.........50.........60.........70.........80.........90.....
 
   124.....130. ........140.........150.........160
Predicted Secondary structure 






...............







............................
Query SS confidence 







. . . . . . . . . . . . . . .




























. . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  SSGHLGGA. . . . . . . . . . . . . . . SQRARELMLLCEAAGYDVVIVETVGVGQS. . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation 
 
     ...............                
  


  
    ............................
Alig confidence 







...............




























............................
Template Conservation                                         
 



 

       
                        
Template Sequence  PNGSIQDLLASQDLAFSIPGVDEAMSFAEVLKQVKSLSYEVIVFDTAPTGHTLRFLQFPTVLEKALAKLSQLSSQFSILG
Template Known Secondary structure 



T


TTS
S

T
S

SSTTTTGGGGT

TTG
Template Predicted Secondary structure 























Template SS confidence 















































































   96...100.........110.........120.........130.........140.........150.........160.........170.....
 
   161........170.........180 .........190.........200......
Predicted Secondary structure  .............................







.....









Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . .



















. . . . .

























Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ETEVARMVDCFISLQIAGGG. . . . . DDLQGIKKGLMEVADLIVINKDDGDN
Query Conservation  .............................        
    
      .....               


 

 
   
Alig confidence  .............................



















.....

























Template Conservation                                            
  
              
    
    

 
      
Template Sequence  ARGGLPGGQNIDELLQKMESLRETISEVNTQFKNPDMTTFVCVCIAEFLSLYETERMIQELTSYGIDTHAIVVNQLLFPG
Template Known Secondary structure  GGGS
TT


T
TTTSST





Template Predicted Secondary structure 





























Template SS confidence 















































































   199200.........210.........220.........230.........240.........250.........260.........270........
 
   207..210.........220.........230.........240.........250........
Predicted Secondary structure 











Query SS confidence 



















































Query Sequence  HTNVAIARHMYESALHILRRKYDEWQPRVLTCSALEKRGIDEIWHAIIDFKT
Query Conservation                
             

 


  
 

 

   
     
Alig confidence 



















































Template Conservation                   
        
  

         


  

  
  
Template Sequence  CEQCNARRKMQKKYLEQIEELYEDFNVVRMPLLVEEVRGKEKLEKFSEMLVH
Template Known Secondary structure 
TTTS

SS
S
STTTS
Template Predicted Secondary structure 

















Template SS confidence 



















































   283......290.........300.........310.........320.........330....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions