Job Description P27254 Confidence 99.79% Date Thu Jan 5 11:43:35 GMT 2012 Rank 27 Aligned Residues 243 % Identity 18% Template c3geiB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:trna modification gtpase mnme; PDBTitle: crystal structure of mnme from chlorobium tepidum in complex2 with gcp Resolution 3.40 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.					30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.														.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	A	T	L	A	E	S	I	R	R	L	R	Q	G	E	R	A	T	L	A	Q	A	M	T	L	V	.	.	.	.	E	S	R	H	P	R	H	Q	A	L	S	T	Q	L	L	D	A	I	M	P	Y	C	G	N	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	R	L	G	V	T	G	T	P	G	A	G
Query Conservation																												.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	G	D	L	S	V	R	L	G	G	L	R	E	Q	L	I	R	S	C	A	L	I	E	L	E	L	D	F	S	E	E	D	V	E	F	Q	S	R	D	E	L	T	M	Q	I	E	T	L	R	S	E	V	N	R	L	I	D	S	Y	Q	H	G	R	I	V	S	E	G	V	S	T	V	I	A	G	K	P	N	A	G
Template Known Secondary structure			T																								T	T		S	S				S	S																																										T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	T	F	L	E	A	F	G	M	L	L	I	R	E	G	L	K	V	A	V	I	A	V	D	P	S	S	P	V	T	G	G	S	I	L	G	D	K	T	R	M	N	D	L	A	R	A	E	A	A	F	I	R	P	V	P	S	S	G	H	L	G	G	A	S	Q	R	A	R	E	L	M	L	L	C	E	A	A	G
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	S	T	L	L	N	T	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	C	F	I	H	D	K	T	M	F	R	L	T	D	M	K	M	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D
Template Known Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T											S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.																																		.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.																	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	V	V	I	V	E	T	V	G	V	G	Q	S	E	T	E	V	A	R	M	V	D	C	F	I	S	L	Q	I	A	G	G	G	D	D	L	Q	G	I	K	K	G	L	M	E	V	A	D	L	I	V	I	N	K	D	D	G	D	N	H	T	N	V	A	I	A	R	H	M	Y	E	S	A	L	H	I	L	R	R
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	I	L	Y	L	L	D	L	G	T	E	R	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	L	T	E	I	R	E	L	K	A	A	H	P	A	A	K	F	L	T	V	A	N	K	L	D	R	A	A	N	A	D	.	.	.	.	.	.	.	.	.	.	.	.	A	L	I	R	A
Template Known Secondary structure									T	T	T	S	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T											T	T	S									T	T	T		S	S			.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.																		.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.													.	.	360	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Y	D	E	W	Q	P	R	V	L	T	C	S	A	L	E	K	R	G	I	D	E	I	W	H	A	I	I	D	F	K	T	A	L	T	A	S	G	R	L	Q	Q	V	R	Q	Q	Q	S	V	E	W	L	R	K	Q	T	E	E	E	V	L	N	H	L	F	A	N	E	D	F	D	R	Y	Y	R	Q	T	L	L	A
Query Conservation
Alig confidence																																	.	.	.	.																						.
Template Conservation																																	.	.	.	.																						.
Template Sequence		I	A	D	G	T	G	T	E	V	I	G	I	S	A	L	N	G	D	G	I	D	T	L	K	Q	H	M	G	D	L	V	.	.	.	.	K	S	V	L	V	T	S	L	R	H	Y	E	A	L	R	N	A	S	D	A	L	.	Q	N	A	L	E	L	I	A	H	E	S	E	T	E	L	I	A	F	E	L	R	A	A
Template Known Secondary structure					T	T	T	S						B	T	T	T	T	B	S									T	T	T	T	.	.	.	.							S	T	T													.									T	T
Template Predicted Secondary structure																																	.	.	.	.																						.
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.					.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.		.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
		307	.	.		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		V	K	N	.	N	T	L	S	P	R	T	G	L	R	Q	L	S	E	F	I	Q	T	Q	Y
Query Conservation					.
Alig confidence					.
Template Conservation
Template Sequence		L	D	Y	V	G	Q	I	T	G	K	V	V	N	E	E	V	L	N	T	I	F	D	K	F
Template Known Secondary structure									T	T	S	S			S	S							T	S	S
Template Predicted Secondary structure
Template SS confidence
		446	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions