Job Description P27254 Confidence 97.49% Date Thu Jan 5 11:43:35 GMT 2012 Rank 396 Aligned Residues 132 % Identity 14% Template c3ez6B_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:plasmid partition protein a; PDBTitle: structure of para-adp complex:tetragonal form Resolution 2.58 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.							80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure															.																			.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.
Query SS confidence															.																			.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.
Query Sequence		P	Y	C	G	N	T	L	R	L	G	V	T	G	.	T	P	G	A	G	K	S	T	F	L	E	A	F	G	M	L	L	I	.	.	.	.	.	.	R	E	G	L	K	V	A	V	I	A	V	D	P	S	S	P	V	T	G	G	S	I	L	G	D	K	T	R	M	N	D	L	A	.	.	.	.	.	.	.	.	.
Query Conservation															.																			.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.
Alig confidence															.																			.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	R	Y	S	E	A	Y	V	I	F	I	S	N	L	K	G	G	V	S	K	T	V	S	T	V	S	L	A	H	A	M	R	A	H	P	H	L	L	M	E	D	L	R	I	L	V	I	D	L	D	P	Q	S	S	A	T	M	F	L	S	H	K	H	S	I	G	I	V	N	A	T	S	A	Q	A	M	L	Q	N	V
Template Known Secondary structure					S	S									S	S	S	S	S	S																T	T	T	G	G	G											T	T								S		T	T	T	T		S		S	S
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
															113	.	.	.	.	.	.	120	.	.	.	.	.																	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	E	A	A	F	I	R	P	V	P	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	H	L	G	G	A	S	Q	R	A	R	E	L	M	L	L	C	E	A	A	G	Y	D	V	V	I	V	E	T	.	V	G	V	G	Q	S	E	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.												.
Template Conservation																																																													.
Template Sequence		S	R	E	E	L	L	E	E	F	I	V	P	S	V	V	P	G	V	D	V	M	P	A	S	I	D	D	A	F	I	A	S	D	W	R	E	L	C	N	E	H	L	P	G	Q	N	I	H	A	V	L	K	E	N	V	I	D	K	L	.	K	S	D	Y	D	F	I	L	V	D	S	G	P	H	L	D	A	F	L	K
Template Known Secondary structure										T					S	S	T	T								T	T							T									S	T	T	S		T	T	S						T					.	T	T	T		S								S			S
Template Predicted Secondary structure																																																													.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.		.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	A	R	M	V	D	C	F	I	S	L	Q	I	A	G	G	G	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	A	L	A	S	A	N	I	L	F	T	P	L	P	P	A	T	V	D
Template Known Secondary structure								S								S	S
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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