Job Description P27254 Confidence 99.76% Date Thu Jan 5 11:43:35 GMT 2012 Rank 36 Aligned Residues 170 % Identity 17% Template c2ywfA_ PDB info PDB header:translation Chain: A: PDB Molecule:gtp-binding protein lepa; PDBTitle: crystal structure of gmppnp-bound lepa from aquifex aeolicus Resolution 2.24 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	C	G	N	T	L	R	L	G	V	T	G	T	P	G	A	G	K	S	T	F	L	E	A	F	G	M	L	L	I	R	E	G	L	K	V	A	V	I	A	V	D	P	S	S	P	V	T	G	G	S	I	L	G	D	K	T	R	M	N	D	L	A	R	A	E	A	A	F	I	R	P	V	P	S	S	G	H	L	G
Query Conservation
Alig confidence																																			.	.	.	.	.											.	.	.	.	.	.	.	.	.	.																					.	.
Template Conservation																																			.	.	.	.	.											.	.	.	.	.	.	.	.	.	.																					.	.
Template Sequence		E	Q	K	N	V	R	N	F	C	I	I	A	H	V	D	H	G	K	S	T	L	A	D	R	L	L	E	Y	T	G	A	I	G	.	.	.	.	.	I	T	V	K	M	Q	A	V	R	M	.	.	.	.	.	.	.	.	.	.	F	Y	K	A	K	D	G	N	T	Y	K	L	H	L	I	D	T	P	G	H	.	.
Template Known Secondary structure			G	G	G										T	T	S	S													T				.	.	.	.	.					S		S				.	.	.	.	.	.	.	.	.	.					T	T	S													S	.	.
Template Predicted Secondary structure																																			.	.	.	.	.											.	.	.	.	.	.	.	.	.	.																					.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.						.	.	.	.	.	40	.	.	.	.											.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	S	Q	R	A	R	E	L	M	L	L	C	E	A	A	G	Y	D	V	V	I	V	E	T	V	G	V	G	Q	S	E	T	E	V	A	R	M	V	D	C	F	I	S	L	Q	I	A	G	G	G	D	D	L	Q	G	I	K	K	G	L	M	E	V	A	D	L	I	V	I	N	K	D	D	G	D	N	H	T	N
Query Conservation
Alig confidence		.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation		.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Sequence		.	.	V	D	F	S	Y	E	V	S	R	A	L	A	A	C	E	G	A	L	L	L	I	D	A	S	Q	G	I	E	A	Q	T	V	A	N	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	K	A	V	E	Q	D	L	V	I	I	P	V	I	N	K	I	D	L	P	S	A	D	.
Template Known Secondary structure		.	.	G	G	G										T		S								T	T	T		S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T										T	T	S	T	T			.
Template Predicted Secondary structure		.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template SS confidence
				84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.																				.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	I	A	R	H	M	Y	E	S	A	L	H	I	L	R	R	K	Y	D	E	W	Q	P	R	V	L	T	C	S	A	L	E	K	R	G	I	D	E	I	W	H	A	I	I	D	F	K	T	A	L	T	A	S	G	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	V	D	R	V	K	K	Q	I	E	E	V	L	G	L	D	P	E	E	A	I	L	A	S	A	K	E	G	I	G	I	E	E	I	L	E	A	I	V	N	R	I	P	P	P	K	G	D	P	Q
Template Known Secondary structure		.	.	.	.	.	.	.												T				G	G	G					B	T	T	T	T	B	S												S							T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions