Job Description P27254 Confidence 99.57% Date Thu Jan 5 11:43:35 GMT 2012 Rank 94 Aligned Residues 193 % Identity 12% Template c2xtnA_ PDB info PDB header:immune system Chain: A: PDB Molecule:gtpase imap family member 2; PDBTitle: crystal structure of gtp-bound human gimap2, amino acid2 residues 1-234 Resolution 1.90 Å

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.																																					.	.	.	.	.
Query SS confidence																																								.																																					.	.	.	.	.
Query Sequence		L	R	L	G	V	T	G	T	P	G	A	G	K	S	T	F	L	E	A	F	G	M	L	L	I	R	E	G	L	K	V	A	V	I	A	V	D	P	.	S	S	P	V	T	G	G	S	I	L	G	D	K	T	R	M	N	D	L	A	R	A	E	A	A	F	I	R	P	V	P	S	S	G	H	L	.	.	.	.	.
Query Conservation																																								.																																					.	.	.	.	.
Alig confidence																							.	.	.	.	.	.												.				.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Template Conservation																							.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Template Sequence		L	R	I	I	L	V	G	K	T	G	T	G	K	S	A	A	G	N	S	I	L	.	.	.	.	.	.	R	K	Q	A	F	E	S	K	L	G	S	Q	T	L	T	.	.	.	.	.	.	.	.	.	K	T	C	S	K	S	Q	G	S	W	G	N	R	E	I	V	I	I	D	T	P	D	M	F	S	W	K	D	H
Template Known Secondary structure								S	S	T	T	S	S										.	.	.	.	.	.	T	S			S						S	S				.	.	.	.	.	.	.	.	.		S									T	T										S	T	T	S	S	S
Template Predicted Secondary structure																							.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.							.	.	.	.	.	.	50	.	.	.	.	.	.	.	.										.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
			129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	G	G	A	S	Q	R	A	R	E	L	M	L	L	C	E	A	A	G	Y	D	V	V	I	V	E	T	V	G	V	G	Q	S	E	T	E	V	A	R	M	V	D	C	F	I	S	L	Q	I	A	G	G	G	D	D	L	Q	G	I	K	K	G	L	M	E	V	A	D	L	I	V	I	N	K	D	D	G	D	N	H
Query Conservation		.
Alig confidence		.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	E	A	L	Y	K	E	V	Q	R	C	Y	L	L	S	A	P	G	P	H	V	L	L	L	V	T	Q	L	G	R	Y	T	S	Q	D	Q	Q	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	R	V	K	E	I	F	G	E	D	A	M	G	H	T	I	V	L	F	T	H	K	E	D	L	G	S
Template Known Secondary structure			T	T													T	T			S								T	T											.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T	G	G	G	G								G	G	G
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.															.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.				.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.
Query SS confidence																															.	.	.
Query Sequence		T	N	V	A	I	A	R	H	M	Y	E	S	A	L	H	I	L	R	R	K	Y	D	E	W	Q	P	R	V	L	.	.	.	T	C	S	A	L	E	K	R	G	I	D	E	I	W	H	A	I	I	D	F	K	T	A	L	T	A	S	G	R	L	Q	Q	V	R	Q	Q	Q	S	V	E	W	L
Query Conservation																															.	.	.
Alig confidence																					.	.									.	.	.
Template Conservation																					.	.
Template Sequence		L	M	D	Y	M	H	D	S	D	N	K	A	L	S	K	L	V	A	A	.	.	C	G	G	R	I	C	A	F	N	N	R	A	E	G	S	N	Q	D	D	Q	V	K	E	L	M	D	C	I	E	D	L	L	M	E	K	N	G	D	H	Y	T	N	G	L	Y	S	L	I	Q	R	S	K	C
Template Known Secondary structure																					.	.	T	T	T							T	T																								T	T	T
Template Predicted Secondary structure																					.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions