Job Description P27254 Confidence 99.36% Date Thu Jan 5 11:43:35 GMT 2012 Rank 137 Aligned Residues 267 % Identity 15% Template c2x2fD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:dynamin-1; PDBTitle: dynamin 1 gtpase dimer, short axis form Resolution 2.00 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	Q	L	L	D	A	I	M	P	Y	C	G	N	T	L	R	L	G	V	T	G	T	P	G	A	G	K	S	T	F	L	E	A	F	G	M	L	L	I	R	E	G	L	K	V	A	V	I	A	V	D	P	S	S	P	V	T	G	G	S	I	L	G	D	K	T	R	M	N	D	L	A	R	A	E	A	A	F	I
Query Conservation
Alig confidence																																						.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Template Sequence		L	V	N	R	L	Q	D	A	F	S	A	D	L	D	L	P	Q	I	A	V	V	G	G	Q	S	A	G	K	S	S	V	L	E	N	F	V	.	.	.	.	.	.	G	R	D	F	L	P	R	G	S	G	I	V	T	R	.	.	.	.	.	.	.	.	.	R	P	L	V	L	Q	L	V	N	A	T	T	E	Y	A
Template Known Secondary structure																								B	T	T	S	S							T	T	T	.	.	.	.	.	.		S	S		S				S	S	S				.	.	.	.	.	.	.	.	.	S										S	S
Template Predicted Secondary structure																																						.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.							.	.	50	.	.	.	.	.	.	.	.	.	60	.										.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.																						.	.	.	.	.	150	.	.	.	.	.	.	.	.	.																		160	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	P	V	P	S	S	G	H	L	G	G	A	S	Q	R	A	R	E	L	M	L	L	C	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	Y	D	V	V	I	V	E	T	V	G	V	G	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	F	L	H	C	K	G	K	K	F	T	D	F	E	E	V	R	L	E	I	E	A	E	T	D	R	V	T	G	T	N	K	G	I	S	P	V	P	I	N	L	R	V	Y	S	P	H	V	L	N	L	T	L	V	D	L	P	G	X	T	K	V	P	V	G	D	Q	P	P	D	I	E	F	Q	I	R	D	X	L	X
Template Known Secondary structure				T	T	S	T	T			B																				S	S	S					S									T	T			S									B		S	S			T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180						.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.
Query SS confidence																					.	.	.	.	.
Query Sequence		T	E	V	A	R	M	V	D	C	F	I	S	L	Q	I	A	G	G	G	.	.	.	.	.	D	D	L	Q	G	I	K	K	G	L	M	E	V	A	D	L	I	V	I	N	K	D	D	G	D	N	H	T	N	V	A	I	A	R	H	M	Y	E	S	A	L	H	I	L	R	R	K	Y	D	E	W	Q	P	R	V	L
Query Conservation																					.	.	.	.	.
Alig confidence																					.	.	.	.	.																																.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.
Template Sequence		Q	F	V	T	K	E	N	C	L	I	L	A	V	S	P	A	N	S	D	L	A	N	S	D	A	L	K	V	A	K	E	V	D	P	Q	G	Q	R	T	I	G	V	I	T	K	L	D	L	X	D	E	G	T	D	A	.	.	.	.	.	.	R	D	V	L	E	N	K	L	L	P	L	R	R	G	Y	I	G	V	V
Template Known Secondary structure					T	S	T	T									T	T	S		G	G	G												T	T		S	S								G	G	G	S		T	T				.	.	.	.	.	.					T	T		S	S			T	T
Template Predicted Secondary structure																																																									.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.							.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.						.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310
Predicted Secondary structure																																																											.	.	.	.	.																	.
Query SS confidence																																																											.	.	.	.	.																	.
Query Sequence		T	C	S	A	L	E	K	R	G	I	D	E	I	W	H	A	I	I	D	F	K	T	A	L	T	A	S	G	R	L	Q	Q	V	R	Q	Q	Q	S	V	E	W	L	R	K	Q	T	E	E	E	V	L	N	H	L	F	A	N	.	.	.	.	.	E	D	F	D	R	Y	Y	R	Q	T	L	L	A	V	K	N	.	N
Query Conservation																																																											.	.	.	.	.																	.
Alig confidence																																																											.	.	.	.	.																	.
Template Conservation
Template Sequence		N	R	S	Q	K	D	I	D	G	K	K	D	I	T	A	A	L	A	A	E	R	K	F	F	L	S	H	P	S	Y	R	H	L	A	D	R	X	G	T	P	Y	L	Q	K	V	L	N	Q	Q	L	T	N	H	I	R	D	T	L	P	G	L	R	N	K	L	Q	S	Q	L	L	S	I	E	K	E	V	E	E	Y	K
Template Known Secondary structure										T	T																		T	T	T	G	G	G	G	G	G		S																			T																					T
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	S	P	R	T	G	L	R	Q	L	S	E	F	I	Q	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	F	S	R	V	D	E	X	L	R	X	Y	H	A	L	K	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions