Job Description P27254 Confidence 98.47% Date Thu Jan 5 11:43:35 GMT 2012 Rank 285 Aligned Residues 169 % Identity 15% Template c2vedA_ PDB info PDB header:transferase Chain: A: PDB Molecule:membrane protein capa1, protein tyrosine kinase; PDBTitle: crystal structure of the chimerical mutant capabk55m2 protein Resolution 2.6 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		38	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																.	.											.																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.											.																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	S	T	Q	L	L	D	A	I	M	P	Y	C	.	.	G	N	T	L	R	L	G	V	T	G	.	T	P	G	A	G	K	S	T	F	L	E	A	F	G	M	L	L	I	R	E	G	L	K	V	A	V	I	A	V	D	P	S	S	P	V	T	G	G	S	I	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																.	.											.																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.											.																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	K	F	R	G	I	R	S	N	I	M	F	A	N	P	D	S	A	V	Q	S	I	V	I	T	S	E	A	P	G	A	G	M	S	T	I	A	A	N	L	A	V	A	Y	A	Q	A	G	Y	K	T	L	I	V	D	G	D	M	R	K	P	T	Q	H	Y	I	F	N	L	P	N	N	E	G	L	S	S	L	L	L
Template Known Secondary structure														T	S		S	S										S	S	T	T	S	S															T	T										S	S	S							T	T				S	S	S						T
Template Predicted Secondary structure
Template SS confidence
		1023	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.
			102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure		.																														.	.																									.	.
Query SS confidence		.																														.	.																									.	.
Query Sequence		.	L	G	D	K	T	R	M	N	D	L	A	R	A	E	A	A	F	I	R	P	V	P	S	S	G	H	L	G	G	.	.	A	S	Q	R	A	R	E	L	M	L	L	C	E	A	A	G	Y	D	V	V	I	V	E	T	.	.	V	G	V	G	Q	S	E	T	E	V	A	R	M	V	D	C	F	I	S	L	Q	I
Query Conservation		.																														.	.																									.	.
Alig confidence		.																														.	.																									.	.
Template Conservation
Template Sequence		N	W	S	T	Y	Q	D	S	I	I	S	T	E	I	E	D	L	D	V	L	T	S	G	P	I	P	P	N	P	S	E	L	I	T	S	R	A	F	A	N	L	Y	D	T	L	L	M	N	Y	N	F	V	I	I	D	T	P	P	V	N	T	V	T	D	A	Q	L	F	S	K	F	T	G	N	V	V	Y	V	V	N
Template Known Secondary structure		T	S	S										S	S	T	T								S			S							T	S															S									T	T	T		T										S
Template Predicted Secondary structure
Template SS confidence
		1103	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.
		177	.	.					180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.																		.
Query SS confidence					.	.	.	.																		.
Query Sequence		A	G	G	.	.	.	.	G	D	D	L	Q	G	I	K	K	G	L	M	E	V	A	D	L	.	I	V	I	N	K	D	D	G	D	N
Query Conservation					.	.	.	.																		.
Alig confidence					.	.	.	.																		.
Template Conservation
Template Sequence		S	E	N	N	N	K	D	E	V	K	K	G	K	E	L	I	E	A	T	G	A	K	L	L	G	V	V	L	N	R	M	P	K	D	K
Template Known Secondary structure		T	T	S															T	T	T
Template Predicted Secondary structure
Template SS confidence
		1183	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions