Job Description P27254 Confidence 99.73% Date Thu Jan 5 11:43:35 GMT 2012 Rank 41 Aligned Residues 223 % Identity 16% Template c2qy9A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:cell division protein ftsy; PDBTitle: structure of the ng+1 construct of the e. coli srp receptor2 ftsy Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.			.	.	20	.	.	.	.	.	.	.	.	.	30									.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50									.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure																		.	.														.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.
Query SS confidence																		.	.														.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.
Query Sequence		I	N	E	A	T	L	A	E	S	I	R	R	L	R	Q	G	.	.	E	R	A	T	L	A	Q	A	M	T	L	V	E	.	.	.	.	.	.	.	.	S	R	H	P	R	H	Q	A	L	S	T	Q	L	L	D	A	I	M	P	Y	.	.	.	.	.	.	.	.	C	G	N	T	L	R	L	G	V	T	G	T	P
Query Conservation																		.	.														.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.
Alig confidence																		.	.														.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	D	D	D	L	F	E	E	L	E	E	Q	L	L	I	A	D	V	G	V	E	T	T	R	K	I	I	T	N	L	T	E	G	A	S	R	K	Q	L	R	D	A	E	A	L	Y	G	L	L	K	E	E	M	G	E	I	L	A	K	V	D	E	P	L	N	V	E	G	K	A	P	F	V	I	L	M	V	G	V	N
Template Known Secondary structure			S														T	T																				T	T			B	G	G	G															T	T								S		T	T									T
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	G	K	S	T	F	L	E	A	F	G	M	L	L	I	R	E	G	L	K	V	A	V	I	A	V	D	P	S	S	P	V	T	G	G	S	I	L	G	D	K	T	R	M	N	D	L	A	R	A	E	A	A	F	I	R	P	V	P	S	S	G	H	L	G	G	A	S	Q	R	A	R	E	L	M	L	L	C	E
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.																								.	.	.
Template Conservation																																		.	.	.	.	.	.	.																								.	.	.
Template Sequence		G	V	G	K	T	T	T	I	G	K	L	A	R	Q	F	E	Q	Q	G	K	S	V	M	L	A	A	G	D	T	F	R	A	.	.	.	.	.	.	.	A	A	V	E	Q	L	Q	V	W	G	Q	R	N	N	I	P	V	I	A	Q	H	T	G	.	.	.	A	D	S	A	S	V	I	F	D	A	I	Q	A	A	K
Template Known Secondary structure		T	S															T	T	T										T	T			.	.	.	.	.	.	.													T	T							S	T	T	.	.	.
Template Predicted Secondary structure																																		.	.	.	.	.	.	.																								.	.	.
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.								.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.				.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.																.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.			.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Query Sequence		A	A	G	Y	D	V	V	I	V	E	T	V	G	V	G	Q	S	E	T	E	V	A	R	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	C	F	I	S	L	Q	I	A	G	G	G	D	D	L	Q	G	I	K	K	G	L	M	E	.	.	V	A	D	L	I	V	I	N	K	D	D	G	D	N
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Conservation
Template Sequence		A	R	N	I	D	V	L	I	A	D	T	A	G	R	L	Q	N	K	S	H	L	M	E	E	L	K	K	I	V	R	V	M	K	K	L	D	V	E	A	P	H	E	V	M	L	T	I	D	A	S	T	G	Q	N	A	V	S	Q	A	K	L	F	H	E	A	V	G	L	T	G	I	T	L	T	K	L	D	G	T	A
Template Known Secondary structure			T	T		S										G	G	G																T	T	T		T	T			S								G	G	G	T														S											T	T		T
Template Predicted Secondary structure
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	N	V	A	I	A	R	H	M	Y	E	S	A	L	H	I	L	R	R	K	Y	D	E	W	Q	P	R	V	L	T	C	S	A	L	E	K	R	G	I	D	E	I
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Sequence		K	G	G	V	I	F	S	V	A	D	Q	F	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	P	I	R	Y	I	G	.	.	V	G	E	R	I	E	D	L
Template Known Secondary structure		T	T	T										.	.	.	.	.	.	.	.	.	.	.	.	.									.	.		S	S	S	G	G	G
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template SS confidence
		453	.	.	.	.	.	.	460	.	.	.	.														.	.	.	.	.	470	.	.			.	.	.	.	.	.	.	480

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions