Job Description P27254 Confidence 99.41% Date Thu Jan 5 11:43:35 GMT 2012 Rank 129 Aligned Residues 144 % Identity 18% Template c2qagA_ PDB info PDB header:cell cycle, structural protein Chain: A: PDB Molecule:septin-2; PDBTitle: crystal structure of human septin trimer 2/6/7 Resolution 4.00 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	Q	L	L	D	A	I	M	P	Y	C	G	N	T	L	R	L	G	V	T	G	T	P	G	A	G	K	S	T	F	L	E	A	F	G	M	L	L	I	R	E	G	L	K	V	A	V	I	A	V	D	P	S	S	P	V	T	G	G	S	I	L	G	D	K	T	R	M	N	D	L	A	R	A	E	A	A	F	I
Query Conservation
Alig confidence																																						.	.	.	.	.	.				.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.				.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	P	N	Q	V	H	R	K	S	V	K	K	G	F	E	F	T	L	M	V	V	G	E	S	G	L	G	K	S	T	L	I	N	S	L	F	.	.	.	.	.	.	L	T	D	.	.	L	T	V	Q	I	E	A	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	G	V	K	L	R	L
Template Known Secondary structure								T																	T	T	S										T	.	.	.	.	.	.	T			.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																						.	.	.	.	.	.				.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.							.	60	.			.	.	.	.	.	.	.	.	70																	.	.	.	.	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180				.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.
Query SS confidence																																																															.	.	.
Query Sequence		R	P	V	P	S	S	G	H	L	G	G	A	S	Q	R	A	R	E	L	M	L	L	C	E	A	A	G	Y	D	V	V	I	V	E	T	V	G	V	G	Q	S	E	T	E	V	A	R	M	V	D	C	F	I	S	L	Q	I	A	G	G	G	.	.	.	D	D	L	Q	G	I	K	K	G	L	M	E	V	A	D	L
Query Conservation																																																															.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	V	V	D	K	T	I	I	S	Y	I	D	E	Q	F	E	R	Y	L	H	D	E	S	G	L	N	R	R	I	I	D	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	H	C	C	F	Y	F	I	S	P	F	G	H	G	L	K	P	L	D	V	A	F	M	K	A	I	H	N	V	N	I	V
Template Known Secondary structure								T																T		S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											S	S	S	S	S												T		S	S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.																130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	I	N	K	D	D	G	D	N	H	T	N	V	A	I	A	R	H	M	Y	E	S	A	L	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	I	A	K	A	D	T	L	T	L	K	E	R	E	R	L	K	K	R	I	L	D	E	I	E
Template Known Secondary structure								S	S	S																T	T
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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