Job Description P27254 Confidence 99.31% Date Thu Jan 5 11:43:35 GMT 2012 Rank 150 Aligned Residues 202 % Identity 17% Template c2px0D_ PDB info PDB header:biosynthetic protein Chain: D: PDB Molecule:flagellar biosynthesis protein flhf; PDBTitle: crystal structure of flhf complexed with gmppnp/mg(2+) Resolution 3.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.							.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.
Query Sequence		I	N	E	A	T	L	A	E	S	I	R	R	L	R	Q	G	E	R	A	T	L	A	Q	A	M	T	L	V	E	S	R	H	P	R	H	Q	A	L	S	T	Q	L	L	D	A	I	M	P	Y	C	.	.	.	.	.	.	G	N	T	L	R	L	G	V	T	G	T	P	G	A	G	K	S	T	F	L	E	A	F	G
Query Conservation																																																				.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.																														.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.
Template Sequence		I	K	E	S	T	K	T	N	T	L	K	K	L	L	.	.	.	.	.	.	.	R	F	S	V	E	A	G	G	L	T	E	E	N	V	V	G	K	L	Q	E	I	L	C	D	M	L	P	S	A	D	K	W	Q	E	P	I	H	S	K	Y	I	V	L	F	G	S	T	G	A	G	K	T	T	T	L	A	K	L	A
Template Known Secondary structure															T	.	.	.	.	.	.	.					S	S	S				S	S	S												T	S			S	T	T	S				S		S	S	B							S	S	S
Template Predicted Secondary structure																.	.	.	.	.	.	.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.								.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
			76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	M	L	L	I	R	E	G	L	K	V	A	V	I	A	V	D	P	S	S	P	V	T	G	G	S	I	L	G	D	K	T	R	M	N	D	L	A	R	A	E	A	A	F	I	R	P	V	P	S	S	G	H	L	G	G	A	S	Q	R	A	R	E	L	M	L	L	C	E	A	A	G	Y	D	V	V	I	V	E	T
Query Conservation		.
Alig confidence		.																	.	.	.													.	.	.	.																		.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.													.	.	.	.																		.	.	.	.	.	.	.	.	.
Template Sequence		A	I	S	M	L	E	K	H	K	K	I	A	F	I	T	T	D	.	.	.	T	Y	R	I	A	A	V	E	Q	L	K	T	.	.	.	.	Y	A	E	L	L	Q	A	P	L	E	V	C	Y	T	K	E	E	.	.	.	.	.	.	.	.	.	F	Q	Q	A	K	E	L	F	S	E	Y	D	H	V	F	V	D	T
Template Known Secondary structure							T	S											.	.	.		S	S	T	T	T	T					T	.	.	.	.					T	T							S	S				.	.	.	.	.	.	.	.	.							T	T	T	T	S	S
Template Predicted Secondary structure																			.	.	.													.	.	.	.																		.	.	.	.	.	.	.	.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.				.	.	.	.	.	.	220	.	.	.	.	.					.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.										.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		155	.	.	.	.	160	.	.	.	.	.	.	.										.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.			.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.																														.	.
Query SS confidence															.	.	.	.	.	.	.	.	.																														.	.
Query Sequence		V	G	V	G	Q	S	E	T	E	V	A	R	M	.	.	.	.	.	.	.	.	.	V	D	C	F	I	S	L	Q	I	A	G	G	G	D	D	L	Q	G	I	K	K	G	L	M	E	V	A	D	L	.	.	I	V	I	N	K	D	D	G	D	N	H	T	N	V	A	I	A	R	H	M	Y	E	S	A	L	H	I
Query Conservation															.	.	.	.	.	.	.	.	.																														.	.
Alig confidence															.	.	.	.	.	.	.	.	.																														.	.																					.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		A	G	R	N	F	K	D	P	Q	Y	I	D	E	L	K	E	T	I	P	F	E	S	S	I	Q	S	F	L	V	L	S	A	T	A	K	Y	E	D	M	K	H	I	V	K	R	F	S	S	V	P	V	N	Q	Y	I	F	T	K	I	D	E	T	T	S	L	G	S	V	F	N	I	L	A	.	.	.	.	.	.	.
Template Known Secondary structure							S	S	G	G	G	T							S				T	T	B								T	T	S						T	T	T	T	T	T	S	S	S	S										T	T	T		S											.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	R	K	Y	D	E	W	Q	P	R	V	L	T	C	S
Query Conservation
Alig confidence		.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	E	S	K	I	G	V	G	F	M	T
Template Known Secondary structure		.	.	.	.	.	.	T		S	S
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								334	.	.	.	.	.	340	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions