Job Description P27254 Confidence 98.02% Date Thu Jan 5 11:43:35 GMT 2012 Rank 325 Aligned Residues 145 % Identity 14% Template c2ph1A_ PDB info PDB header:ligand binding protein Chain: A: PDB Molecule:nucleotide-binding protein; PDBTitle: crystal structure of nucleotide-binding protein af2382 from2 archaeoglobus fulgidus, northeast structural genomics target gr165 Resolution 2.70 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.								.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																						.																																			.	.	.	.	.	.	.
Query SS confidence																						.																																			.	.	.	.	.	.	.
Query Sequence		T	Q	L	L	D	A	I	M	P	Y	C	G	N	T	L	R	L	G	V	T	.	G	T	P	G	A	G	K	S	T	F	L	E	A	F	G	M	L	L	I	R	E	G	L	K	V	A	V	I	A	V	D	P	S	S	.	.	.	.	.	.	.	P	V	T	G	G	S	I	L	G	D	K	T	R	M	N	D	L	A
Query Conservation																						.																																			.	.	.	.	.	.	.
Alig confidence														.	.							.																																			.	.	.	.	.	.	.
Template Conservation														.	.
Template Sequence		D	E	E	I	K	E	R	L	G	K	I	K	.	.	S	R	I	A	V	X	S	G	K	G	G	V	G	K	S	T	V	T	A	L	L	A	V	H	Y	A	R	Q	G	K	K	V	G	I	L	D	A	D	F	L	G	P	S	I	P	I	L	F	G	L	R	N	A	R	I	A	V	S	A	E	G	L	E	P	V	L
Template Known Secondary structure										T	T		S	.	.								S	S	S		T	T															T	T										S	S								T	T			S							T	T
Template Predicted Secondary structure														.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.			.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130											.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.				.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.																												.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.																												.	.	.
Query Sequence		R	A	E	A	A	F	I	R	P	V	P	S	S	G	H	L	G	G	.	.	.	.	.	.	.	.	.	.	A	S	Q	R	A	R	E	L	M	L	L	C	E	A	A	G	Y	D	V	V	I	V	E	T	V	G	V	.	.	.	G	Q	S	E	T	E	V	A	R	M	V	D	C	F	I	S	L	Q	I	A	G	G
Query Conservation																				.	.	.	.	.	.	.	.	.	.																												.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.																												.	.	.
Template Conservation
Template Sequence		T	Q	K	Y	G	I	K	V	X	S	X	Q	F	L	L	P	K	E	N	T	P	V	I	W	R	G	P	L	I	A	G	X	I	R	E	F	L	G	R	V	A	W	G	E	L	D	H	L	L	I	D	L	P	P	G	T	G	D	A	P	L	T	V	X	Q	D	A	K	P	T	G	V	V	V	V	S	T	P	Q	E
Template Known Secondary structure			T	T	T							G	G	G	G	S	T	T		S	S						S													S	B				S		S								S	S	S	S	S												S								S	S	S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	D	L	Q	G	I	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	A	V	I	V	E	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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