Job Description P27254 Confidence 99.36% Date Thu Jan 5 11:43:35 GMT 2012 Rank 140 Aligned Residues 166 % Identity 16% Template c2h18A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:adp-ribosylation factor-like protein 8a; PDBTitle: structure of human adp-ribosylation factor-like 10b (arl10b) Resolution 1.90 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	L	D	A	I	M	P	Y	C	G	N	T	L	R	L	G	V	T	G	T	P	G	A	G	K	S	T	F	L	E	A	F	G	M	L	L	I	R	E	G	L	K	V	A	V	I	A	V	D	P	S	S	P	V	T	G	G	S	I	L	G	D	K	T	R	M	N	D	L	A	R	A	E	A	A	F	I	R	P
Query Conservation
Alig confidence													.	.																						.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.																						.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	W	F	K	A	L	F	W	K	E	E	.	.	M	E	L	T	L	V	G	L	Q	Y	S	G	K	T	T	F	V	N	V	I	A	.	.	.	.	.	.	S	G	Q	F	N	E	D	M	I	N	M	R	K	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	K	G	N	V	T	I	K	L
Template Known Secondary structure										T	S		.	.								S	T	T	S	S									T	.	.	.	.	.	.	T	T													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T
Template Predicted Secondary structure													.	.																						.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20			.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.							.	.	.	.	.	.	.	.	50	.	.	.	.	.																		.	.	.	.	60	.	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	S	S	G	H	L	G	G	A	S	Q	R	A	R	E	L	M	L	L	C	E	A	A	G	Y	D	V	V	I	V	E	T	V	G	V	G	Q	S	E	T	E	V	A	R	M	V	D	C	F	I	S	L	Q	I	A	G	G	G	D	D	L	Q	G	I	K	K	G	L	M	E	V	A	D	L	I	V	I	N	K
Query Conservation
Alig confidence								.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	D	I	G	G	Q	.	.	.	.	P	R	F	R	S	M	W	E	R	Y	C	R	G	V	S	A	I	V	Y	M	V	D	A	A	D	Q	E	K	I	E	A	S	K	N	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	H	N	L	L	D	K	P	Q	L	Q	G	I	P	V	L	V	L	G	N	K
Template Known Secondary structure				S	S			.	.	.	.											T	T	T		S								T	T		G	G	G								.	.	.	.	.	.	.	.	.	.	.	.	.	.						T		G	G	G	T	T
Template Predicted Secondary structure								.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		70	.	.	.	.	.					.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110															.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	G	D	N	H	T	N	V	A	I	A	R	H	M	Y	E	S	A	L	H	I	L	R	R	K	Y	D	E	W	Q	P	R	V	L	T	C	S	A	L	E	K	R	G	I	D	E	I	W	H	A	I	I	D	F
Query Conservation
Alig confidence																							.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.
Template Sequence		R	D	L	P	G	A	L	D	E	K	E	L	I	E	K	M	N	L	S	A	I	.	.	.	.	.	.	Q	D	R	E	I	C	C	Y	S	I	S	C	K	E	K	D	N	I	D	I	T	L	Q	W	L	I	Q	H
Template Known Secondary structure		T	T	S	T	T											T	T	G	G	G		.	.	.	.	.	.		S	S								B	T	T	T	T	B	S											T
Template Predicted Secondary structure																							.	.	.	.	.	.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.							.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions