Job Description P27254 Confidence 99.53% Date Thu Jan 5 11:43:35 GMT 2012 Rank 104 Aligned Residues 144 % Identity 19% Template c2dykB_ PDB info PDB header:ribosome Chain: B: PDB Molecule:gtp-binding protein; PDBTitle: crystal structure of n-terminal gtp-binding domain of enga from2 thermus thermophilus hb8 Resolution 1.96 Å

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.				.	.	.	130	.
Predicted Secondary structure																																																																										.	.	.
Query SS confidence																																																																										.	.	.
Query Sequence		L	R	L	G	V	T	G	T	P	G	A	G	K	S	T	F	L	E	A	F	G	M	L	L	I	R	E	G	L	K	V	A	V	I	A	V	D	P	S	S	P	V	T	G	G	S	I	L	G	D	K	T	R	M	N	D	L	A	R	A	E	A	A	F	I	R	P	V	P	S	S	G	.	.	.	H	L	G	G	A
Query Conservation																																																																										.	.	.
Alig confidence																							.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Template Conservation																							.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	K	V	V	I	V	G	R	P	N	V	G	K	S	S	L	F	N	R	L	L	.	.	.	.	.	.	K	K	R	S	D	L	K	E	G	V	V	E	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	R	F	L	L	V	D	T	G	G	L	W	S	G	D	K	W	E
Template Known Secondary structure										T	T	S	S										.	.	.	.	.	.														T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T									G	G	G		S	S	S	S
Template Predicted Secondary structure																							.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.							.	.	.	.	.	.	.	30	.	.	.	.	.	.																					.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	R	A	R	E	L	M	L	L	C	E	A	A	G	Y	D	V	V	I	V	E	T	V	G	V	G	Q	S	E	T	E	V	A	R	M	V	D	C	F	I	S	L	Q	I	A	G	G	G	D	D	L	Q	G	I	K	K	G	L	M	E	V	A	D	L	I	V	I	N	K	D	D	G	D	N	H	T	N	V	A
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Sequence		K	K	I	Q	E	K	V	D	R	A	L	E	D	A	E	V	V	L	F	A	V	D	G	R	A	E	L	T	Q	A	D	Y	E	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Y	L	R	R	K	G	K	P	V	I	L	V	A	T	K	V	D	D	P	K	H	E	L	Y	.
Template Known Secondary structure												T	T	T		S								S	S	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T												S	G	G	G	G	G	G	.
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.																				.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	R	H	M	Y	E	S	A	L	H	I	L	R	R	K	Y	D	E	W	Q	P	R	V	L	T	C	S	A	L	E	K	R	G	I	D	E	I	W	H	A	I	I	D	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	L	G	P	L	Y	G	L	G	F	G	D	P	I	P	T	S	S	E	H	A	R	G	L	E	E	L	L	E	A	I	W	E	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	G	G	S	S	S		S					B	T	T	T	T	B	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions