Job Description P27254 Confidence 99.77% Date Thu Jan 5 11:43:35 GMT 2012 Rank 33 Aligned Residues 227 % Identity 17% Template c1zu4A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:ftsy; PDBTitle: crystal structure of ftsy from mycoplasma mycoides- space2 group p21212 Resolution 1.95 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.			.	.	20	.	.	.	.	.	.	.	.	.	30	.							.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.										.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																		.	.															.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.															.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Query Sequence		I	N	E	A	T	L	A	E	S	I	R	R	L	R	Q	G	.	.	E	R	A	T	L	A	Q	A	M	T	L	V	E	S	.	.	.	.	.	.	R	H	P	R	H	Q	A	L	S	T	Q	L	L	D	A	I	M	P	Y	C	.	.	.	.	.	.	.	.	.	G	N	T	L	R	L	G	V	T	G	T	P	G
Query Conservation																		.	.															.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Alig confidence																		.	.															.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	D	D	E	F	F	E	E	L	E	D	V	L	I	Q	T	D	M	G	M	K	M	V	L	K	V	S	N	L	V	R	K	K	T	K	R	D	T	S	F	E	N	I	K	D	A	L	V	E	S	L	Y	Q	A	Y	T	D	N	D	W	Y	R	I	D	F	K	E	N	R	L	N	I	F	M	L	V	G	V	N	G
Template Known Secondary structure			S														T	T																			T	T																					S									T	T	S								S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	K	S	T	F	L	E	A	F	G	M	L	L	I	R	E	G	L	K	V	A	V	I	A	V	D	P	S	S	P	V	T	G	G	S	I	L	G	D	K	T	R	M	N	D	L	A	R	A	E	A	A	F	I	R	P	V	P	S	S	G	H	L	G	G	A	S	Q	R	A	R	E	L	M	L	L	C	E	A
Query Conservation
Alig confidence																													.	.	.																			.	.	.
Template Conservation																													.	.	.																			.	.	.
Template Sequence		T	G	K	T	T	S	L	A	K	M	A	N	Y	Y	A	E	L	G	Y	K	V	L	I	A	A	A	D	.	.	.	T	F	R	A	G	A	T	Q	Q	L	E	E	W	I	K	T	R	L	.	.	.	N	N	K	V	D	L	V	K	A	N	K	L	N	A	D	P	A	S	V	V	F	D	A	I	K	K	A	K	E
Template Known Secondary structure		S	S															T	T										.	.	.		S													T	T	T	S	.	.	.		T	T							S	S	T	T
Template Predicted Secondary structure																													.	.	.																			.	.	.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.				.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.				.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.																.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.			.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Query Sequence		A	G	Y	D	V	V	I	V	E	T	V	G	V	G	Q	S	E	T	E	V	A	R	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	C	F	I	S	L	Q	I	A	G	G	G	D	D	L	Q	G	I	K	K	G	L	M	E	V	A	D	L	.	.	I	V	I	N	K	D	D	G	D	N	H
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Template Conservation
Template Sequence		Q	N	Y	D	L	L	L	I	D	T	A	G	R	L	Q	N	K	T	N	L	M	A	E	L	E	K	M	N	K	I	I	Q	Q	V	E	K	S	A	P	H	E	V	L	L	V	I	D	A	T	T	G	Q	N	G	V	I	Q	A	E	E	F	S	K	V	A	D	V	S	G	I	I	L	T	K	M	D	S	T	S	K
Template Known Secondary structure		T	T		S										G	G	G																	T	T		T	T			S								G	G	G	T											T	T	T	S										G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	V	A	I	A	R	H	M	Y	E	S	A	L	H	I	L	R	R	K	Y	D	E	W	Q	P	R	V	L	T	C	S	A	L	E	K	R	G	I	D	E	I
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Sequence		G	G	I	G	L	A	I	K	E	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	P	I	K	M	I	G	.	.	V	G	E	K	V	D	D	L
Template Known Secondary structure		T	T										.	.	.	.	.	.	.	.	.	.	.	.	.									.	.		S	S	S	T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template SS confidence
		361	.	.	.	.	.	.	.	.	370	.														.	.	.	.	.	.	.	.			380	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions