Job Description P27254 Confidence 99.90% Date Thu Jan 5 11:43:35 GMT 2012 Rank 12 Aligned Residues 198 % Identity 22% Template c1wf3A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:gtp-binding protein; PDBTitle: crystal structure of gtp-binding protein tt1341 from thermus2 thermophilus hb8 Resolution 1.88 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	L	R	L	G	V	T	G	T	P	G	A	G	K	S	T	F	L	E	A	F	G	M	L	L	I	R	E	G	L	K	V	A	V	I	A	V	D	P	S	S	P	V	T	G	G	S	I	L	G	D	K	T	R	M	N	D	L	A	R	A	E	A	A	F	I	R	P	V	P	S	S	G	H	L	G	G	A	S
Query Conservation
Alig confidence																									.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Template Sequence		Y	S	G	F	V	A	I	V	G	K	P	N	V	G	K	S	T	L	L	N	N	L	L	.	.	.	.	.	.	G	V	K	V	A	P	I	S	P	R	P	Q	T	T	.	.	.	.	.	.	.	.	.	R	K	R	L	R	G	I	L	T	E	G	R	R	Q	I	V	F	V	D	T	P	G	L	H	K	P	M	D
Template Known Secondary structure											S	T	T	S	S										.	.	.	.	.	.	T	S			S				S	S	S				.	.	.	.	.	.	.	.	.		S									T	T																S
Template Predicted Secondary structure																									.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.							.	30	.	.	.	.	.	.	.	.	.	40	.	.										.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180							.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.
Query Sequence		Q	R	A	R	E	L	M	L	L	C	E	A	A	G	Y	D	V	V	I	V	E	T	V	G	V	G	Q	S	E	T	E	V	A	R	M	V	D	C	F	I	S	L	Q	I	A	G	G	G	.	.	.	.	.	.	D	D	L	Q	G	I	K	K	G	L	M	E	V	A	D	L	I	V	I	N	K	D	D	G	D	N
Query Conservation																																																		.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	G	E	F	M	D	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	Y	E	A	L	A	D	V	N	A	V	V	W	V	V	D	L	R	H	P	P	T	P	E	D	E	L	V	A	R	A	L	K	P	L	V	G	K	V	P	I	L	L	V	G	N	K	L	D	A	A	K
Template Known Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	S	S		S								T	T	S														G	G	G	T	T	T	S									G	G	G		S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.																				.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		H	T	N	V	A	I	A	R	H	M	Y	E	S	A	L	H	I	L	R	R	K	Y	D	E	W	Q	P	R	V	L	T	C	S	A	L	E	K	R	G	I	D	E	I	W	H	A	I	I	D	F	K	T	A	L	T	A	S	G	R	L	Q	Q	V	.	R	Q	Q	Q	S	V	E	W	L	R	K	Q	T	E	E	E
Query Conservation																																																																	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.																																									.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	P	E	E	A	M	K	A	Y	H	E	L	.	.	.	.	.	.	.	.	.	.	.	L	P	E	A	E	P	R	M	L	S	A	L	D	E	R	Q	V	A	E	L	K	A	D	L	L	A	L	M	P	E	G	P	F	F	Y	P	E	D	Y	A	K	S	D	Q	T	F	G	E	W	V	A	E	I	L	R	E	E
Template Known Secondary structure		S											T	.	.	.	.	.	.	.	.	.	.	.	S	T	T	S							T	T														T	T			B				S	S		T	T			S	B	S	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.												.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		286	.	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	N	H	L	F	A	N	E	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	M	K	R	L	W	H	E	V	P
Template Known Secondary structure					T			T	T
Template Predicted Secondary structure
Template SS confidence
		201	.	.	.	.	.	.	.	.	210

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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