Return to main results Retrieve Phyre Job Id

Job DescriptionP0AC88
Confidence98.99%DateThu Jan 5 11:17:36 GMT 2012
Rank262Aligned Residues237
% Identity14%Templated2bgka1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution1.6

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD
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Template Sequence  DKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQK. . . . . . VCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAK
Template Known Secondary structure  T
STTSTT
S
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TTT

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   16...20.........30.........40.........50..... ....60.........70.........80.........
 
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Query Sequence  EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPR. . SPYAV
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Template Sequence  HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTA
Template Known Secondary structure  S








SS
SSTTT

TGGGT


GGGT


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   90.........100.........110.........120.........130.........140.........150.........160.........
 
   160.........170..... ....180.........190.........200.........210.........220.........230......
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Query Sequence  AKLYAYWITVNYRESY. . . GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKM
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Template Sequence  TKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKG. . . . . . . . . . TLLRAEDVADA
Template Known Secondary structure  GGGTS

S



TTSSS

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   170.........180.........190.........200.........210.........220........ .230.........
 
   237..240..... ....250....
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Query Sequence  QWMMLQQEQ. . . . PEDFVIATG
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Template Sequence  VAYLAGDESKYVSGLNLVIDGG
Template Known Secondary structure  SGGGTT

S
STT
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   240.........250.........260.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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