 |
Job Description | P0AC88 | Confidence | 96.21% | Date | Thu Jan 5 11:17:36 GMT 2012 |
Rank | 376 | Aligned Residues | 77 |
% Identity | 17% | Template | d1vi2a1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| Aminoacid dehydrogenase-like, C-terminal domain
|
Resolution | 2.10 |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | |
. | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | K | V | A | L | I | T | G | V | T | G | Q | D | G | S | Y | L | A | E | F | L | L | E | K | G | Y | . |
E | V | H | G | I | K | R | R | A | S | S | F | N | T | E | R | V | D | H | I | Y | Q | D | P | H | T | C | N | P | K | F | H | L | H | Y | G | D | L | S | D | T | S | N | L | T | R | I | L | R | E | V | Q | P |
Query Conservation |   |
  |
|   |
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|   |   |
|
|   |   |
|   | . |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|
|
|
|
| . |
|
|
|
|
|
|   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
Template Sequence |   |
G | K | T | X | V | L | L | G | A | . |
G | G | A | S | T | A | I | G | A | Q | G | A | I | E | G | L | K | E | I | K | L | F | N | R | R | D | E | F | F | D | K | A | L | A | F | A | Q | R | V | N | E | N | T | D | . |
. |
. |
C | V | V | T | V | T | D | L | A | D | Q | Q | A | F | A | E | A | L | A | S | A | D | I |
Template Known Secondary structure |   |
T |
|  |  |  |  |  |
|
| . | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |  |
| S | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | . | . | . |
|  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  | T |
| S |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . |
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
124 | . | . | . | . | . | 130 | . | . | |
. | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | |
|
|
. | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . |
  |
  |   |
81 | . |
Predicted Secondary structure |   |
|
|
Query SS confidence |   |
|
|
Query Sequence |   |
D | E |
Query Conservation |   |
  |   |
Alig confidence |   |
|
|
Template Conservation |   |
|
|
Template Sequence |   |
L | T |
Template Known Secondary structure |   |
 |  |
Template Predicted Secondary structure |   |
 |
|
Template SS confidence |   |
|
|
  |   |
200 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|