Return to main results Retrieve Phyre Job Id

Job DescriptionP0AC88
Confidence100.00%DateThu Jan 5 11:17:36 GMT 2012
Rank12Aligned Residues324
% Identity17%Templated1oc2a_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution1.5

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  MSKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQP
Query Conservation 
 
 










  

  

  
  
    
                          
  

 
             
Alig confidence 


.






































....
































Template Conservation 

 .










  

  

  
  
    
         ....          
  
  

 
             
Template Sequence  FKN. IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNK. . . . ANLEAILGDRVELVVGDIADAELVDKLAAKADA
Template Known Secondary structure 
S.TTTS
TT



TT

G....GGTGGG
SSS

TT
TT
S
Template Predicted Secondary structure 

.














....














Template SS confidence 















































































   4.. ...10.........20.........30.........40..... ....50.........60.........70........
 
   81........90.........100.........110.........120.........130 .........140.........150....
Predicted Secondary structure 

























......























Query SS confidence 

















































. . . . . .























Query Sequence  DEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQ. . . . . . ASTSELYGLVQEIPQKETTPFYPR
Query Conservation        
                                           ......                        
Alig confidence 

















































......























Template Conservation                                               
   
                              
Template Sequence  IVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPS
Template Known Secondary structure 

S




TT
GGGG

B

GGGSTTTT
STTSSB
TTS




Template Predicted Secondary structure 

































































Template SS confidence 















































































   7980.........90.........100.........110.........120.........130.........140.........150........
 
   155....160.........170.........180.........190.........200.........210.........220.........230....
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  SPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYV
Query Conservation            
                 
     
                                      
 
 
 
Alig confidence 







































....



































Template Conservation        
                           
     ....                               
 
 
Template Sequence  SPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHI. . . . EKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHS
Template Known Secondary structure  S



STT

T....TST


TTS


Template Predicted Secondary structure 












....

















Template SS confidence 















































































   159160.........170.........180.........190........ .200.........210.........220.........230....
 
   235....240..... ....250.........260.........270.........280.........290.........300.........310...
Predicted Secondary structure 


.



































Query SS confidence 










.



































































Query Sequence  KMQWMMLQQEQ. PEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFR
Query Conservation       
     .     
      
            
                                          
Alig confidence 










.





























..............................







Template Conservation                  

      
  
    
    
    ..............................        
Template Sequence  TGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AYDHVTDR
Template Known Secondary structure 

TT


S
TT

TT..............................
S


Template Predicted Secondary structure 


















..............................




Template SS confidence 















































































   235....240.........250.........260.........270...... ...280....
 
   314.....320.........330....... ..340.........350.........360...
Predicted Secondary structure 











.





Query SS confidence 























.

























Query Sequence  PAEVETLLGDPTKAHEKLGWKPEI. TLREMVSEMVANDLEAAKKHSLLKSH
Query Conservation           
 


   


 
  . 
 
 
   
    
           
Alig confidence 























.

























Template Conservation           
  

   

  
    




     
              
Template Sequence  AGHDLRYAIDASKLRDELGWTPQFTDFSEGLEETIQWYTDNQDWWKAEKEA
Template Known Secondary structure  TT


B

B





S


T
Template Predicted Secondary structure 













Template SS confidence 


















































   285....290.........300.........310.........320.........330.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions