Return to main results Retrieve Phyre Job Id

Job DescriptionP0AC88
Confidence100.00%DateThu Jan 5 11:17:36 GMT 2012
Rank20Aligned Residues329
% Identity24%Templated1bxka_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  MSKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQP
Query Conservation 
 
 










  

  

  
  
    
                          
  

 
             
Alig confidence 


.






































....
































Template Conservation 

 .










  

  

  
  
    
         ....          
  
  

 
             
Template Sequence  MRK. ILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLM. . . . SLAPVAQSERFAFEKVDICDRAELARVFTEHQP
Template Known Secondary structure 

.TTTS
S




TT

GG....GTTTTTTSTT


TT


Template Predicted Secondary structure 

.











....












Template SS confidence 















































































   1.. ......10.........20.........30.........40.. .......50.........60.........70.....
 
   81........90.........100.........110.........120...... ...130.........140.........150..
Predicted Secondary structure 





















........

























Query SS confidence 













































. . . . . . . .

























Query Sequence  DEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKT. . . . . . . . RFYQASTSELYGLVQEIPQKETTPFY
Query Conservation        
                                       ........                          
Alig confidence 













































........

























Template Conservation        
                         
                        
                      
Template Sequence  DCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYA
Template Known Secondary structure  S









SSS

TTS

GGGG



SSS

B
TTS


Template Predicted Secondary structure 



















































Template SS confidence 















































































   76...80.........90.........100.........110.........120.........130.........140.........150.....
 
   153......160.........170.........180.........190.........200.........210.........220.........230..
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  PRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKD
Query Conservation              
                 
     
                                      
 
 
Alig confidence 









































....

































Template Conservation                                            ....                               
 
Template Sequence  PSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFP. . . . EKLIPLMILNALAGKSLPVYGNGQQIRDWLYVED
Template Known Secondary structure 

S



STT

T....TSTT



TTS


Template Predicted Secondary structure 

















....





















Template SS confidence 















































































   156...160.........170.........180.........190....... ..200.........210.........220.........230.
 
   233......240..... ....250.........260.........270.........280.........290.........300.........310.
Predicted Secondary structure 


.

































Query SS confidence 












.

































































Query Sequence  YVKMQWMMLQQEQ. PEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRY
Query Conservation   
     
     .     
      
            
                                        
Alig confidence 












.



































............................

Template Conservation   
                 
              
               ............................  
Template Sequence  HARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGV. . . . . . . . . . . . . . . . . . . . . . . . . . . . AH
Template Known Secondary structure 

TT


S



S

TT
............................S
Template Predicted Secondary structure 




















............................

Template SS confidence 















































































   232.......240.........250.........260.........270.........280. ..
 
   312.......320.........330.........340.........350.........360......
Predicted Secondary structure 





















Query SS confidence 






















































Query Sequence  FRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAAKKHSLLKSHGYD
Query Conservation             
 


   


 
   
 
 
   
    
              
Alig confidence 






















































Template Conservation             
  

   

  
     
 
     
                 
Template Sequence  YRDLITFRYAIDASKIARELGCVPQETFESGMRKTVQWYLANESWWKQVQDGSYQ
Template Known Secondary structure  GGGG

B
B

T







SGGG
Template Predicted Secondary structure 



















Template SS confidence 






















































   284.....290.........300.........310.........320.........330........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions