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Job DescriptionP0AC88
Confidence99.24%DateThu Jan 5 11:17:36 GMT 2012
Rank145Aligned Residues219
% Identity14%Templatec3v2hB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:d-beta-hydroxybutyrate dehydrogenase; PDBTitle: the crystal structure of d-beta-hydroxybutyrate dehydrogenase from2 sinorhizobium meliloti
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD
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Template Sequence  TKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEV. . . AGLSSGTVLHHPADXTKPSEIADXXAXVADR
Template Known Secondary structure  T
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SSTT
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TT
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   2.......10.........20.........30.........40....... ..50.........60.........70........
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK
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Template Sequence  FGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPXKKKGW. GRIINIASAHGLVASPFKSAYVAAK
Template Known Secondary structure  SS
S








GGG

TT
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GGGTS

TT
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   7980.........90.........100.........110.........120.........130.. .......140.........150.......
 
   162.......170.... .....180.........190.........200.........210.........220.........230........
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Query Sequence  LYAYWITVNYRES. . . YGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQW
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Template Sequence  HGIXGLTKTVALEVAESGVTVNSICPGYVLGQPT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KKFITVEQVASLAL
Template Known Secondary structure  TGGGT
SB


TT................................
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B
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   158.160.........170.........180.........190. ........200.....
 
   239240..... ....250......
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Query Sequence  MMLQQEQ. . . . PEDFVIATGVQ
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Template Sequence  YLAGDDAAQITGTHVSXDGGWT
Template Known Secondary structure  SGGGGG

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   235....240.........250......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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