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Job DescriptionP0AC88
Confidence99.25%DateThu Jan 5 11:17:36 GMT 2012
Rank138Aligned Residues225
% Identity15%Templatec3v2gA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] reductase; PDBTitle: crystal structure of a dehydrogenase/reductase from sinorhizobium2 meliloti 1021
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.......
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Query Sequence  SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILRE. . . .
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Template Sequence  GKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERA. . . . QAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEA
Template Known Secondary structure  T
TTTSTT
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TT
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   31........40.........50.........60......... 70.........80.........90.........100......
 
   78.80.........90.........100.........110.........120.........130.........140.........150.....
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Query Sequence  . . VQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRS
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Template Sequence  LGGLDILVNSAGIWHSAPLEETTVADFDEVXAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPW. . . . . . . . PGIS
Template Known Secondary structure  S











GGG

T

TT


GGGT


S........TT
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   107..110.........120.........130.........140.........150.........160.........170.... ....
 
   156...160.........170..... ....180.........190.........200.........210.........220.........230..
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Query Sequence  PYAVAKLYAYWITVNYRESY. . . GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKD
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Template Sequence  LYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDXNPADGDHAEAQRE. . . . . . . . . . . . . . . . RIATGSYGEPQD
Template Known Secondary structure  GGGT

SB
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SS
SS................T
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B
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   179180.........190.........200.........210.........220.........230 .........240..
 
   233......240..... ....250....
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Query Sequence  YVKMQWMMLQQEQ. . . . PEDFVIATG
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Template Sequence  IAGLVAWLAGPQGKFVTGASLTIDGG
Template Known Secondary structure  SGGGTT

S
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   243......250.........260........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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