Job Description P0AC88 Confidence 99.19% Date Thu Jan 5 11:17:36 GMT 2012 Rank 175 Aligned Residues 203 % Identity 15% Template c3tpcG_ PDB info PDB header:oxidoreductase Chain: G: PDB Molecule:short chain alcohol dehydrogenase-related dehydrogenase; PDBTitle: crystal structure of a hypothtical protein sma1452 from sinorhizobium2 meliloti 1021 Resolution 2.34 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		S	K	V	A	L	I	T	G	V	T	G	Q	D	G	S	Y	L	A	E	F	L	L	E	K	G	Y	E	V	H	G	I	K	R	R	A	S	S	F	N	T	E	R	V	D	H	I	Y	Q	D	P	H	T	C	N	P	K	F	H	L	H	Y	G	D	L	S	D	T	S	N	L	T	R	I	L	R	E	V	Q	.	.
Query Conservation																																																																																.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	R	V	F	I	V	T	G	A	S	S	G	L	G	A	A	V	T	R	X	L	A	Q	E	G	A	T	V	L	G	L	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	V	R	F	R	N	A	D	V	T	N	E	A	D	A	T	A	A	L	A	F	A	K	Q	E
Template Known Secondary structure		T							T	T	T	S													T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.																							40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
					80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.					.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure		.	.	.																	.	.	.	.
Query SS confidence		.	.	.																	.	.	.	.
Query Sequence		.	.	.	P	D	E	V	Y	N	L	G	A	M	S	H	V	A	V	S	.	.	.	.	F	E	S	P	E	Y	T	A	D	V	D	A	M	G	T	L	R	L	L	E	A	I	R	F	L	G	L	E	K	K	T	R	F	Y	Q	A	S	T	S	E	L	Y	G	L	V	Q	E	I	P	Q	K	E	T	T	P	F	Y
Query Conservation		.	.	.																	.	.	.	.
Alig confidence		.	.	.																	.	.	.	.
Template Conservation
Template Sequence		F	G	H	V	H	G	L	V	N	C	A	G	T	A	P	G	E	K	I	L	G	R	S	G	P	H	A	L	D	S	F	A	R	T	V	A	V	N	L	I	G	T	F	N	X	I	R	L	A	A	E	V	X	S	Q	G	E	P	D	A	D	G	E	R	G	V	I	V	N	T	A	S	I	A	A	F	D	G	Q	I
Template Known Secondary structure			S																	S	B		S	S	S	B														T															T	T	S				T	T	S											T							T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.				.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.
Query SS confidence																										.	.	.
Query Sequence		P	R	S	P	Y	A	V	A	K	L	Y	A	Y	W	I	T	V	N	Y	R	E	S	Y	G	.	.	.	M	Y	A	C	N	G	I	L	F	N	H	E	S	P	R	R	G	E	T	F	V	T	R	K	I	T	R	A	I	A	N	I	A	Q	G	L	E	S	C	L	Y	L	G	N	M	D	S	L	R	D	W	G	H
Query Conservation																										.	.	.
Alig confidence																										.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	Q	A	A	Y	A	A	S	K	G	G	V	A	A	L	T	L	P	A	A	R	E	L	A	R	F	G	I	R	V	V	T	I	A	P	G	I	F	D	T	P	A	S	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	P	P	R	L	G	R
Template Known Secondary structure		T																							G	G	G	T										S	B	S					S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S		S		B
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.																													.	.	.	.	.	.	210
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		A	K	D	Y	V	K	M	Q	W	M	M	L	Q	Q	E	Q	.	.	P	E	D	F	V	I	A	T	G
Query Conservation																		.	.
Alig confidence																		.	.
Template Conservation
Template Sequence		A	E	E	Y	A	A	L	V	K	H	I	C	E	N	T	X	L	N	G	E	V	I	R	L	D	G	A
Template Known Secondary structure																T	T			S						S	T	T
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions