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Job DescriptionP0AC88
Confidence99.29%DateThu Jan 5 11:17:36 GMT 2012
Rank122Aligned Residues240
% Identity12%Templatec3rihB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:short chain dehydrogenase or reductase; PDBTitle: crystal structure of a putative short chain dehydrogenase or reductase2 from mycobacterium abscessus
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD
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Template Sequence  ARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVT. . . . AELGELGAGNVIGVRLDVSDPGSCADAARTVVDA
Template Known Secondary structure  T
TTTTSTT
SSGGGG....TTSSSS


TT
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   1920.........30.........40.........50.........60 .........70.........80.........90....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK
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Template Sequence  FGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASK
Template Known Secondary structure  S











TTT

TTSS


SBTTTB

TT
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   95....100.........110.........120.........130.........140.........150.........160.........170....
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  LYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMML
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Template Sequence  AAQLGFMRTAAIELAPRGVTV. . . NAILPGNILTEGLVDMGEEYISGMARSIPMGMLGSP. . . . . . . . . VDIGHLAAFLA
Template Known Secondary structure  GGGT
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TT
TT
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B
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   175....180.........190..... ....200.........210.........220.........230. ........240..
 
   242... ....250.......
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Query Sequence  QQEQ. . . . PEDFVIATGVQY
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Template Sequence  TDEAGYITGQAIVVDGGQVL
Template Known Secondary structure  SGGGTT

S
STTTT
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   243......250.........260..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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