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Job DescriptionP0AC88
Confidence99.39%DateThu Jan 5 11:17:36 GMT 2012
Rank95Aligned Residues230
% Identity13%Templatec3iccA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:putative 3-oxoacyl-(acyl carrier protein) reductase; PDBTitle: crystal structure of a putative 3-oxoacyl-(acyl carrier protein)2 reductase from bacillus anthracis at 1.87 a resolution
Resolution1.87 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD
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Template Sequence  GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRK. . . . EEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNE
Template Known Secondary structure  T
TT
SSTT
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TTS
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   4.....10.........20.........30......... 40.........50.........60.........70.........
 
   82 .......90.........100.........110.........120.........130.........140.........
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Query Sequence  E. . . . . . . . . . . . VYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETT
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Template Sequence  LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRXVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT. . . . . . . . . RI
Template Known Secondary structure  SSS







B
GGG

TTTT

GGG.........TS
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   80.........90.........100.........110.........120.........130.........140........ .150
 
   150.........160.........170..... ....180.........190.........200.........210.........220......
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Query Sequence  PFYPRSPYAVAKLYAYWITVNYRESY. . . GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRD
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Template Sequence  SLPDFIAYSXTKGAINTXTFTLAKQLGARGITVNAILPGFVKTDXNAELLSDPXXKQYATTISAFNRL. . . . . . . . . . . .
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TTBGGGT


B

SSSTTTTTSTSTTSS
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   151........160.........170.........180.........190.........200.........210........
 
   227..230.........240..... ....250.......
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Query Sequence  WGHAKDYVKMQWMMLQQEQ. . . . PEDFVIATGVQY
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Template Sequence  . GEVEDIADTAAFLASPDSRWVTGQLIDVSGGSCL
Template Known Secondary structure  .B
SGGGTT

S
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   219220.........230.........240.........250..
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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