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Job DescriptionP0AC88
Confidence99.85%DateThu Jan 5 11:17:36 GMT 2012
Rank77Aligned Residues212
% Identity14%Templatec3e8xA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:putative nad-dependent epimerase/dehydratase; PDBTitle: putative nad-dependent epimerase/dehydratase from bacillus halodurans.
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD
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Template Sequence  GXRVLVVGANGKVARYLLSELKNKGHEPVAXVRNEEQGPELRE. . . . . . . . . . RGASDIVVANLEE. . . . . . . . DFSHAF
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TTTSTT
SSGGG..........TT
S

TTS........

GGGG
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   0.........10.........20.........30.........40.. .......50..... ....60.
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK
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Template Sequence  ASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIXVSSVGTVD. . . . . . . . . . . . . . . PDQGPXNXRHY
Template Known Secondary structure  TT
S




TTS
TTTT



TT
S
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GGG
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   62.......70.........80.........90.........100.........110..... ....120......
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  LYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMML
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Template Sequence  LVAKRLADDELKRSSLDYTIVRPGPLSNEEST. . . . . . . . . . . . . . . . . . . GKVTVSPHFSEITRSITRHDVAKVIAELV
Template Known Secondary structure  SSS
S
S


...................SSS
S




T
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   127..130.........140.........150........ .160.........170.........180.......
 
   242... ....250.........260......
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Query Sequence  QQEQ. . PEDFVIATGVQYSVRQFVEMA
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Template Sequence  DQQHTIGKTFEVLNG. DTPIAKVVEQL
Template Known Secondary structure  T
GGGTT.T
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   188.190.........200.. .......210...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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