Job Description P0AC88 Confidence 99.95% Date Thu Jan 5 11:17:36 GMT 2012 Rank 67 Aligned Residues 284 % Identity 11% Template c3e48B_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative nucleoside-diphosphate-sugar epimerase; PDBTitle: crystal structure of a nucleoside-diphosphate-sugar epimerase2 (sav0421) from staphylococcus aureus, northeast structural genomics3 consortium target zr319 Resolution 1.60 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		K	V	A	L	I	T	G	V	T	G	Q	D	G	S	Y	L	A	E	F	L	L	E	K	G	.	Y	E	V	H	G	I	K	R	R	A	S	S	F	N	T	E	R	V	D	H	I	Y	Q	D	P	H	T	C	N	P	K	F	H	L	H	Y	G	D	L	S	D	T	S	N	L	T	R	I	L	R	E	V	Q	P	D
Query Conservation																										.
Alig confidence																										.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	N	I	X	L	T	G	A	T	G	H	L	G	T	H	I	T	N	Q	A	I	A	N	H	I	D	H	F	H	I	G	V	R	N	V	E	K	.	.	.	.	.	.	.	.	.	.	.	V	P	D	D	W	R	G	K	V	S	V	R	Q	L	D	Y	F	N	Q	E	S	X	V	E	A	F	K	G	X	D	T	V
Template Known Secondary structure								T	T	T	S													T	T		S	S						S		G	G	G	.	.	.	.	.	.	.	.	.	.	.	S		G	G	G	B	T	T	B							T	T										T	T		S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.												.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	Y	N	L	G	A	M	S	H	V	A	V	S	F	E	S	P	E	Y	T	A	D	V	D	A	M	G	T	L	R	L	L	E	A	I	R	F	L	G	L	E	K	K	T	R	F	Y	Q	A	S	T	S	E	L	Y	G	L	V	Q	E	I	P	Q	K	E	T	T	P	F	Y	P	R	S	P	Y	A	V	A	K
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	F	I	P	S	I	I	H	P	S	.	.	.	.	.	.	.	.	.	.	.	.	F	K	R	I	P	E	V	E	N	L	V	Y	A	A	K	Q	S	G	V	A	H	I	I	F	I	G	Y	Y	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	H	N	N	P	F	H	X	S	P	Y	F
Template Known Secondary structure										S		.	.	.	.	.	.	.	.	.	.	.	.				T														T										S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T				T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.													80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.																	110	.	.	.	.	.	.	.	.	.	120	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	A	Y	W	I	T	V	N	Y	R	E	S	Y	G	M	Y	A	C	N	G	I	L	F	N	H	E	S	P	R	R	G	E	T	F	V	T	R	K	I	T	R	A	I	A	N	I	A	Q	G	L	E	S	C	L	Y	L	G	N	M	D	S	L	R	D	W	G	H	A	K	D	Y	V	K	M	Q	W	M	M	L
Query Conservation
Alig confidence								.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	Y	A	S	R	L	.	.	.	.	L	S	T	S	G	I	D	Y	T	Y	V	R	X	A	X	Y	X	D	.	.	.	.	.	.	.	.	.	.	.	.	P	L	K	P	Y	L	P	E	L	X	N	X	H	K	L	I	Y	P	A	G	D	G	R	I	N	Y	I	T	R	N	D	I	A	R	G	V	I	A	I	I
Template Known Secondary structure								.	.	.	.																	S	T	.	.	.	.	.	.	.	.	.	.	.	.	T												T							T	T
Template Predicted Secondary structure								.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		122	.	.	.	.	.					.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.													.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		242	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		Q	Q	E	Q	.	P	E	D	F	V	I	A	T	G	V	Q	Y	S	V	R	Q	F	V	E	M	A	A	A	Q	L	G	I	K	L	R	F	E	G	T	G	V	E	E	K	G	I	V	V	S	V	T	G	H	D	A	P	G	V	K	P	G	D	V	I	I	A	V	D	P	R	Y	F	R	P	A	E	V	E	T	L
Query Conservation						.
Alig confidence						.																																												.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.
Template Sequence		K	N	P	D	T	W	G	K	R	Y	L	L	S	G	Y	S	Y	D	X	K	E	L	A	A	I	L	S	E	A	S	G	T	E	I	K	Y	E	P	V	S	L	E	T	F	A	E	X	Y	.	.	.	.	.	.	.	.	.	.	D	E	P	K	G	F	G	A	L	L	A	S	X	Y	H	A	G	A	R	G	L	L
Template Known Secondary structure				G	G	G	T	T	S																							S	S															T	T	.	.	.	.	.	.	.	.	.	.			S	T	T														T	T	T	T
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.											.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	D	P	T	K	A	H	E	K	L	G	W	K	P	E	I	T	L	R	E	M	V	S	E	M	V	A	N	D	L	E
Query Conservation
Alig confidence																		.
Template Conservation																		.
Template Sequence		D	Q	E	S	N	D	F	K	Q	L	V	N	D	Q	P	Q	.	T	L	Q	S	F	L	Q	E	N	I	L	E	H	H	H
Template Known Secondary structure						S							S	S				.							T	T	S					S	S
Template Predicted Secondary structure																		.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions