Job Description P0AC88 Confidence 99.82% Date Thu Jan 5 11:17:36 GMT 2012 Rank 79 Aligned Residues 212 % Identity 13% Template c3dqpA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:oxidoreductase ylbe; PDBTitle: crystal structure of the oxidoreductase ylbe from2 lactococcus lactis, northeast structural genomics3 consortium target kr121. Resolution 1.40 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	A	L	I	T	G	V	T	G	Q	D	G	S	Y	L	A	E	F	L	L	E	K	G	Y	E	V	H	G	I	K	R	R	A	S	S	F	N	T	E	R	V	D	H	I	Y	Q	D	P	H	T	C	N	P	K	F	H	L	H	Y	G	D	L	S	D	T	S	N	L	T	R	I	L	R	E	V	Q	P	D	E
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Sequence		X	K	I	F	I	V	G	S	T	G	R	V	G	K	S	L	L	K	S	L	S	T	T	D	Y	Q	I	Y	A	G	A	R	K	V	E	Q	V	P	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	N	N	V	K	A	V	H	F	D	V	.	D	W	T	P	E	E	X	A	K	Q	L	H	G	X	D	A
Template Known Secondary structure								S	T	T	S											T	T	S	S								S	S	G	G	G	S			.	.	.	.	.	.	.	.	.	.	.	.	.		T	T								T	.	T	S							T	T	T	T	T		S
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.														40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Y	N	L	G	A	M	S	H	V	A	V	S	F	E	S	P	E	Y	T	A	D	V	D	A	M	G	T	L	R	L	L	E	A	I	R	F	L	G	L	E	K	K	T	R	F	Y	Q	A	S	T	S	E	L	Y	G	L	V	Q	E	I	P	Q	K	E	T	T	P	F	Y	P	R	S	P	Y	A	V	A	K	L
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.
Template Sequence		I	I	N	V	S	G	S	G	G	K	S	L	.	.	.	.	.	.	.	.	L	K	V	D	L	Y	G	A	V	K	L	X	Q	A	A	E	K	A	E	V	K	R	F	I	L	L	S	T	I	F	S	L	Q	.	.	.	.	.	.	.	.	.	.	P	E	K	W	I	G	A	G	F	D	A	L	K	D	Y	Y	I
Template Known Secondary structure									T	T	S	S		.	.	.	.	.	.	.	.																		T	T										T	T	T	T		.	.	.	.	.	.	.	.	.	.	G	G	G			S						T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.									.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.											.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	Y	W	I	T	V	N	Y	R	E	S	Y	G	M	Y	A	C	N	G	I	L	F	N	H	E	S	P	R	R	G	E	T	F	V	T	R	K	I	T	R	A	I	A	N	I	A	Q	G	L	E	S	C	L	Y	L	G	N	M	D	S	L	R	D	W	G	H	A	K	D	Y	V	K	M	Q	W	M	M	L	Q
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	K	H	F	A	D	L	Y	L	T	K	E	T	N	L	D	Y	T	I	I	Q	P	G	A	L	T	E	E	E	A	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	D	I	N	D	E	V	S	A	S	N	T	I	G	D	V	A	D	T	I	K	E	L	V	X
Template Known Secondary structure													S												S				S				S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S	S																			T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160																							.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		243	.	.			.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		Q	E	Q	.	.	P	E	D	F	V	I	A	T	G	V	Q	Y	S	V	R	Q	F	V	E	M	A	A	A	Q
Query Conservation					.	.
Alig confidence					.	.										.
Template Conservation																.
Template Sequence		T	D	H	S	I	G	K	V	I	S	X	H	N	G	.	K	T	A	I	K	E	A	L	E	S	L	L	E	H
Template Known Secondary structure			G	G	G	T	T									.										T	T	T	T	T
Template Predicted Secondary structure																.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions