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Job DescriptionP0AC88
Confidence99.84%DateThu Jan 5 11:17:36 GMT 2012
Rank78Aligned Residues210
% Identity13%Templatec3dhnA_
PDB info PDB header:isomerase, lyaseChain: A: PDB Molecule:nad-dependent epimerase/dehydratase; PDBTitle: crystal structure of the putative epimerase q89z24_bactn2 from bacteroides thetaiotaomicron. northeast structural3 genomics consortium target btr310.
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MSKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQP
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Template Sequence  VKK. IVLIGASGFVGSALLNEALNRGFEVTAVVRHPEK. . . . . . . . . . . . IKIENEHLKVKKADVSSLDEVCEVCKGADA
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.T

TTT

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TT


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   4.. ...10.........20.........30.........40 .........50.........60.........70
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  DEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVA
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Template Sequence  VISAFNPIYD. . . . . . . . . . . . . . . . . . ETIKVYLTIIDGVKKAGVNRFLXVGGAGSLFIAPGLRLXDSGEVPENILPGV
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S..................TT
S

STTSTTGGGTT
S
GGG
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   71........80 .........90.........100.........110.........120.........130..
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  KLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMM
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Template Sequence  KALGEFYLNFLXKEKEIDWVFFSPAADXRPGVRTGRYRL. . . . . . . . . . . . . . GKDDXIVDIVGNSHISVEDYAAAXIDE
Template Known Secondary structure  TGGG

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   139140.........150.........160.........170....... ..180.........190.........200....
 
   241.... ....250.....
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Query Sequence  LQQEQ. . PEDFVIATGV
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Template Sequence  LEHPKHHQERFTIGYLE
Template Known Secondary structure  S



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   205....210.........220.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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