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Job DescriptionP0AC88
Confidence99.94%DateThu Jan 5 11:17:36 GMT 2012
Rank70Aligned Residues210
% Identity14%Templatec3ay3C_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:nad-dependent epimerase/dehydratase; PDBTitle: crystal structure of glucuronic acid dehydrogeanse from2 chromohalobacter salexigens
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MSKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQP
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Template Sequence  MLNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA. . . . . . . . . . . . . . EAHEEIVACDLADAQAVHDLVKDCDG
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TTTSGGGGGGG

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   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  DEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVA
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Template Sequence  IIHLGGVSVERPWN. . . . . . . . DILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLS
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S

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GGGSTTSBTTS
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   67..70.........80 .........90.........100.........110.........120.........130........
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  KLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMM
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Template Sequence  KCFGEDLASLYYHKFDIETLNIRIGSCFPK. . . . . . . . . . . . . . . . . . . . . . . . . . . PKDARMMATWLSVDDFMRLMKRA
Template Known Secondary structure  TT



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   139140.........150.........160........ .170.........180.........190.
 
   241.... ....250.........
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Query Sequence  LQQEQ. . PEDFVIATGVQYSV
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Template Sequence  FVAPKLGCTVVYGASANTESW
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   192.......200.........210..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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