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Job DescriptionP0AC88
Confidence99.21%DateThu Jan 5 11:17:36 GMT 2012
Rank166Aligned Residues239
% Identity11%Templatec3ak4C_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:nadh-dependent quinuclidinone reductase; PDBTitle: crystal structure of nadh-dependent quinuclidinone reductase from2 agrobacterium tumefaciens
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD
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Template Sequence  GRKAIVTGGSKGIGAAIARALDKAGATVAIADLDV. . . . . . . . MAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDA
Template Known Secondary structure  T
TTTSTT
S
........T
TT


TT
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   910.........20.........30.........40... ......50.........60.........70.........80
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK
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Template Sequence  LGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASK
Template Known Secondary structure  TS










GGG

TT




GGGTS

TT
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   81........90.........100.........110.........120.........130.........140.........150.........160
 
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Query Sequence  LYAYWITVNYRES. . . YGMYACNGILFNHESPRR. . . . . GETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDY
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Template Sequence  FAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLG. . . . . . . . . RIEEPEDV
Template Known Secondary structure  GGGT

SB
ST

T
TT
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B
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   161........170.........180.........190.........200.........210.........220... ......230.
 
   234.....240.... .....250.......
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Query Sequence  VKMQWMMLQQE. . . . QPEDFVIATGVQY
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Template Sequence  ADVVVFLASDAARFMTGQGINVTGGVRM
Template Known Secondary structure  SGGGTT

S
SSSSS
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   232.......240.........250.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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